C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 7 open reading frame 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146826 C7orf43 9606 - 7:100154420-100158715 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316937 C7orf43-001 100154420-100158685 protein_coding
  ENST00000394035 C7orf43-007 100154420-100156440 protein_coding
  ENST00000419037 C7orf43-004 100154420-100158659 nonsense_mediated_decay
  ENST00000419841 C7orf43-005 100154824-100157759 protein_coding
  ENST00000448720 C7orf43-006 100154424-100157139 nonsense_mediated_decay
  ENST00000456769 C7orf43-008 100154424-100158715 protein_coding
  ENST00000457641 C7orf43-010 100154420-100158020 protein_coding
  ENST00000470260 C7orf43-014 100154475-100155674 retained_intron
  ENST00000472061 C7orf43-011 100156939-100157452 processed_transcript
  ENST00000498638 C7orf43-012 100156265-100157199 processed_transcript
  ENST00000612870 C7orf43-201 100154424-100156440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverLungOvaryPlacentaTestisENST00000316937ENST00000419841ENST00000457641
Transcript ID Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000316937 N/A 1.912±0.00 1.072±0.00 1.828±0.51 1.043±0.00 8.362±0.00 7.814±0.91 15.634±7.24
ENST00000419841 6.431±0.00 N/A N/A N/A N/A N/A N/A 14.827±0.00
ENST00000457641 N/A 2.178±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0002JK CIL_0002JK_0001 CGP 7:100148907-100158715
CIL_0005BN CIL_0005BN_0002 CGP 7:100154420-100168750

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078891 C7H7orf43 chromosome 7 open reading frame 43 protein_coding Danio_rerio
ENSMUSG00000036948 BC037034 cDNA sequence BC037034 protein_coding Mus_musculus
ENSMUSG00000091964 BC037034 cDNA sequence BC037034 protein_coding Mus_musculus

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