C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribonuclease, RNase K
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000093989 Rnasek 10090 - 11:70238124-70239842 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040428 Rnasek-001 70238124-70239842 protein_coding
  ENSMUST00000125752 Rnasek-002 70238124-70239780 nonsense_mediated_decay
  ENSMUST00000141880 Rnasek-003 70238127-70239058 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040428ENSMUST00000141880
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040428 171.639±55.46 204.548±33.10 81.039±14.63 64.930±22.32 109.297±28.01 87.482±17.77 71.861±26.07 240.825±27.01 64.581±23.63 81.579±13.91 98.858±5.94 92.726±38.70 86.541±19.75 60.385±22.70
ENSMUST00000141880 N/A N/A N/A 34.161±0.00 N/A N/A N/A N/A N/A N/A N/A 70.088±9.45 103.116±7.67 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SP CIL_0006SP_0003 CGP 11:70235206-70239830

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004521 IEA:ISS endoribonuclease activity
GO:0005575 ND cellular_component
GO:0009303 IEA:ISS rRNA transcription
GO:0016021 IEA integral component of membrane
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069336 rnasekb ribonuclease, RNase K b protein_coding Danio_rerio
ENSG00000219200 RNASEK ribonuclease, RNase K protein_coding Homo_sapiens

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