C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006SP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069336-ENSDARG00000088755 CGP 7955 10:23116427-23185296
GeneTranscriptPositionBiotype
ENSDARG00000057111 (CU633861.2)
Uncharacterized protein 		ENSDART00000079714 (CU633861.2-201) 23140620-23141741 protein_coding
ENSDARG00000069337 (med11)
mediator complex subunit 11 		ENSDART00000066154 (med11-201) 23171558-23175834 protein_coding
ENSDARG00000088755 (zgc:103508)
zgc:103508 		ENSDART00000021368 (zgc:103508-201) 23118698-23185296 protein_coding
ENSDART00000124011 (zgc:103508-202) 23118895-23126864 protein_coding
ENSDART00000147511 (zgc:103508-001) 23118652-23119918 protein_coding
CIL_0006SP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000219200-ENSG00000161939 CGP 9606 17:7012417-7017520
GeneTranscriptPositionBiotype
ENSG00000161939 (RNASEK-C17orf49)
RNASEK-C17orf49 readthrough 		ENST00000547302 (RNASEK-C17orf49-004) 7013733-7017404 protein_coding
ENST00000547863 (RNASEK-C17orf49-002) 7012660-7017520 retained_intron
ENST00000549775 (RNASEK-C17orf49-001) 7012635-7017502 retained_intron
ENST00000607564 (RNASEK-C17orf49-005) 7013597-7015073 retained_intron
ENSG00000258315 (C17orf49)
chromosome 17 open reading frame 49 		ENST00000439424 (C17orf49-001) 7014782-7017520 protein_coding
ENST00000546495 (C17orf49-006) 7014495-7017375 protein_coding
ENST00000546760 (C17orf49-003) 7014753-7017506 protein_coding
ENST00000547709 (C17orf49-009) 7016165-7017520 processed_transcript
ENST00000547747 (C17orf49-007) 7015843-7017521 nonsense_mediated_decay
ENST00000549857 (C17orf49-002) 7014754-7017525 retained_intron
ENST00000550038 (C17orf49-008) 7015817-7017304 processed_transcript
ENST00000552402 (C17orf49-004) 7014769-7017519 protein_coding
ENST00000552775 (C17orf49-005) 7015040-7017520 protein_coding
CIL_0006SP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020831-ENSMUSG00000040904 CGP 10090 11:70235206-70239830
GeneTranscriptPositionBiotype
ENSMUSG00000040904 (Gm21988)
predicted gene 21988 		ENSMUST00000176116 (Gm21988-001) 70235206-70239830 nonsense_mediated_decay
ENSMUST00000176268 (Gm21988-002) 70235250-70239803 nonsense_mediated_decay
ENSMUSG00000093989 (Rnasek)
ribonuclease, RNase K 		ENSMUST00000040428 (Rnasek-001) 70238124-70239842 protein_coding
ENSMUST00000125752 (Rnasek-002) 70238124-70239780 nonsense_mediated_decay
ENSMUST00000141880 (Rnasek-003) 70238127-70239058 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SP_0001ENSDARG00000057111ENSDART00000079714ENSDARG00000069337ENSDART00000066154ENSDARG00000088755ENSDART00000021368ENSDART00000124011ENSDART00000147511CIL_0006SP_0002ENSG00000161939ENST00000547302ENST00000547863ENST00000549775ENST00000607564ENSG00000258315ENST00000439424ENST00000546495ENST00000546760ENST00000547709ENST00000547747ENST00000549857ENST00000550038ENST00000552402ENST00000552775CIL_0006SP_0003ENSMUSG00000040904ENSMUST00000176116ENSMUST00000176268ENSMUSG00000093989ENSMUST00000040428ENSMUST00000125752ENSMUST00000141880
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SP_0001ENSDARG00000057111ENSDART00000079714ENSDARG00000069337ENSDART00000066154ENSDARG00000088755ENSDART00000021368ENSDART00000124011ENSDART00000147511CIL_0006SP_0002ENSG00000161939ENST00000547302ENST00000547863ENST00000607564ENSG00000258315ENST00000439424CIL_0006SP_0003ENSMUSG00000040904ENSMUST00000176116ENSMUSG00000093989ENSMUST00000040428ENSMUST00000141880
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000057111 ENSDART00000079714 N/A N/A N/A 0.792±0.01 N/A N/A 0.316±0.24 0.438±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000069337 ENSDART00000066154 N/A N/A N/A 1.637±0.65 N/A N/A 0.491±0.30 0.389±0.20 N/A N/A 0.085±0.00 N/A N/A N/A
ENSDARG00000088755 ENSDART00000021368 N/A N/A N/A 0.510±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000124011 N/A N/A N/A 1.310±0.64 N/A N/A 0.321±0.24 0.054±0.04 0.063±0.00 N/A 0.172±0.00 N/A N/A N/A
ENSDART00000147511 N/A N/A N/A 1.641±0.14 N/A N/A 0.747±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161939 ENST00000547302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.315±0.00 14.681±0.00 N/A
ENST00000547863 N/A N/A N/A N/A N/A N/A N/A N/A 1.608±0.00 N/A N/A N/A N/A N/A
ENST00000549775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.446±0.00 N/A N/A N/A
ENSG00000258315 ENST00000439424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.306±0.00 34.305±5.37 17.928±0.00
ENST00000546495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040904 ENSMUST00000176116 11.356±0.00 10.543±0.00 5.731±0.78 7.873±1.45 7.876±0.00 5.640±1.83 5.320±1.12 15.939±0.31 5.533±1.25 5.297±0.47 7.957±0.00 6.978±0.93 N/A 5.292±0.21
ENSMUST00000176268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093989 ENSMUST00000040428 171.639±55.46 204.548±33.10 81.039±14.63 64.930±22.32 109.297±28.01 87.482±17.77 71.861±26.07 240.825±27.01 64.581±23.63 81.579±13.91 98.858±5.94 92.726±38.70 86.541±19.75 60.385±22.70
ENSMUST00000125752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141880 N/A N/A N/A 34.161±0.00 N/A N/A N/A N/A N/A N/A N/A 70.088±9.45 103.116±7.67 N/A

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