C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bridging integrator 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000098112 Bin2 10090 - 15:100641077-100669553 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000182068 Bin2-006 100645305-100669505 protein_coding
  ENSMUST00000182494 Bin2-002 100645443-100651660 processed_transcript
  ENSMUST00000182574 Bin2-007 100645401-100669525 protein_coding
  ENSMUST00000182775 Bin2-005 100641083-100669527 protein_coding
  ENSMUST00000182814 Bin2-004 100641083-100669505 protein_coding
  ENSMUST00000183193 Bin2-003 100649137-100650719 retained_intron
  ENSMUST00000183211 Bin2-001 100641077-100669553 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182068ENSMUST00000182494ENSMUST00000182574ENSMUST00000182775ENSMUST00000182814ENSMUST00000183193ENSMUST00000183211
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182068 N/A 1.339±0.31 N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A 0.140±0.00 N/A N/A N/A
ENSMUST00000182494 N/A N/A N/A N/A 6.429±0.00 N/A N/A N/A N/A N/A 0.494±0.11 N/A N/A N/A
ENSMUST00000182574 N/A N/A N/A 2.733±0.00 N/A N/A N/A N/A N/A N/A N/A 3.437±1.33 69.316±46.86 25.909±0.00
ENSMUST00000182775 N/A N/A N/A N/A N/A 0.347±0.00 N/A 0.151±0.02 0.352±0.27 N/A 0.165±0.00 N/A N/A N/A
ENSMUST00000182814 1.020±0.83 0.406±0.22 0.679±0.00 0.294±0.08 4.197±2.77 0.465±0.08 0.198±0.09 0.367±0.21 0.454±0.19 1.514±0.12 0.046±0.02 0.638±0.10 N/A N/A
ENSMUST00000183193 0.861±0.00 0.999±0.06 N/A N/A 4.465±1.24 2.298±0.58 N/A N/A 0.894±0.00 N/A 0.102±0.00 N/A N/A N/A
ENSMUST00000183211 0.635±0.03 N/A 0.980±0.38 0.940±0.83 3.690±1.67 0.806±0.00 0.403±0.01 0.757±0.31 11.335±7.08 2.668±0.59 0.875±0.00 1.013±0.33 28.607±19.16 7.414±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003K2 CIL_0003K2_0002 CGP 15:100621342-100669553
CIL_0006JT CIL_0006JT_0002 CGP 15:100641077-100687920

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001891 IEA phagocytic cup
GO:0002102 IEA podosome
GO:0005543 IEA phospholipid binding
GO:0005737 IEA cytoplasm
GO:0006911 IEA phagocytosis, engulfment
GO:0060326 IEA cell chemotaxis
GO:0071800 IEA podosome assembly
GO:0097320 IEA membrane tubulation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003219 bin2a bridging integrator 2a protein_coding Danio_rerio
ENSDARG00000010255 bin2b bridging integrator 2b protein_coding Danio_rerio
ENSG00000110934 BIN2 bridging integrator 2 protein_coding Homo_sapiens

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