C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003K2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170545-ENSG00000110934 CGP 9606 12:51244558-51324668
GeneTranscriptPositionBiotype
ENSG00000110934 (BIN2)
bridging integrator 2 		ENST00000267012 (BIN2-201) 51281039-51324154 protein_coding
ENST00000452142 (BIN2-004) 51281038-51324154 protein_coding
ENST00000544402 (BIN2-002) 51281282-51324668 protein_coding
ENST00000603177 (BIN2-009) 51292162-51297368 retained_intron
ENST00000603260 (BIN2-007) 51322585-51324085 processed_transcript
ENST00000604560 (BIN2-005) 51281038-51324115 protein_coding
ENST00000604702 (BIN2-006) 51322748-51324093 processed_transcript
ENST00000605039 (BIN2-003) 51281038-51324154 retained_intron
ENST00000605423 (BIN2-010) 51302717-51324142 nonsense_mediated_decay
ENST00000605819 (BIN2-008) 51292202-51297373 retained_intron
ENST00000615107 (BIN2-001) 51281038-51324198 protein_coding
CIL_0003K2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053559-ENSMUSG00000098112 CGP 10090 15:100621342-100669553
GeneTranscriptPositionBiotype
ENSMUSG00000053559 (Smagp)
small cell adhesion glycoprotein 		ENSMUST00000066068 (Smagp-201) 100621342-100636855 protein_coding
ENSMUST00000172334 (Smagp-202) 100621342-100636865 protein_coding
ENSMUSG00000098112 (Bin2)
bridging integrator 2 		ENSMUST00000182068 (Bin2-006) 100645305-100669505 protein_coding
ENSMUST00000182494 (Bin2-002) 100645443-100651660 processed_transcript
ENSMUST00000182574 (Bin2-007) 100645401-100669525 protein_coding
ENSMUST00000182775 (Bin2-005) 100641083-100669527 protein_coding
ENSMUST00000182814 (Bin2-004) 100641083-100669505 protein_coding
ENSMUST00000183193 (Bin2-003) 100649137-100650719 retained_intron
ENSMUST00000183211 (Bin2-001) 100641077-100669553 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003K2_0001ENSG00000110934ENST00000267012ENST00000452142ENST00000544402ENST00000603177ENST00000603260ENST00000604560ENST00000604702ENST00000605039ENST00000605423ENST00000605819ENST00000615107CIL_0003K2_0002ENSMUSG00000053559ENSMUST00000066068ENSMUST00000172334ENSMUSG00000098112ENSMUST00000182068ENSMUST00000182494ENSMUST00000182574ENSMUST00000182775ENSMUST00000182814ENSMUST00000183193ENSMUST00000183211
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003K2_0001ENSG00000110934ENST00000267012ENST00000452142ENST00000544402ENST00000603260ENST00000604560ENST00000605039ENST00000605423ENST00000615107CIL_0003K2_0002ENSMUSG00000053559ENSMUST00000066068ENSMUST00000172334ENSMUSG00000098112ENSMUST00000182068ENSMUST00000182494ENSMUST00000182574ENSMUST00000182775ENSMUST00000182814ENSMUST00000183193ENSMUST00000183211
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110934 ENST00000267012 2.740±0.00 12.642±0.00 N/A 0.829±0.34 0.785±0.00 N/A 0.437±0.37 0.252±0.00 1.168±0.00 6.505±0.00 N/A 0.843±0.55 8.917±2.03 4.139±0.14
ENST00000452142 N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A N/A N/A
ENST00000544402 N/A N/A 0.112±0.00 N/A N/A 0.389±0.00 N/A 0.410±0.21 0.270±0.00 2.180±0.00 0.121±0.00 0.521±0.00 9.494±7.44 7.457±0.00
ENST00000603177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.389±0.00
ENST00000604560 0.506±0.00 N/A N/A 0.199±0.00 0.522±0.32 0.798±0.00 0.322±0.00 0.758±0.00 0.342±0.00 1.288±0.00 N/A 0.471±0.00 N/A N/A
ENST00000604702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605039 N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A N/A 0.604±0.00 N/A 0.168±0.01 N/A N/A
ENST00000605423 N/A N/A N/A 1.154±0.00 N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A
ENST00000605819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615107 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.846±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000053559 ENSMUST00000066068 7.841±1.12 12.306±2.71 13.206±1.14 0.305±0.04 14.222±2.47 192.704±25.38 3.151±0.80 20.878±1.61 7.072±5.23 30.585±4.44 0.798±0.55 9.295±2.95 9.545±1.97 0.767±0.25
ENSMUST00000172334 11.579±3.41 6.519±1.07 20.173±3.11 0.952±0.01 8.981±1.83 N/A 4.374±0.75 35.861±5.06 10.421±5.04 14.382±1.38 1.182±0.23 6.117±3.21 37.076±15.87 0.907±0.34
ENSMUSG00000098112 ENSMUST00000182068 N/A 1.339±0.31 N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A 0.140±0.00 N/A N/A N/A
ENSMUST00000182494 N/A N/A N/A N/A 6.429±0.00 N/A N/A N/A N/A N/A 0.494±0.11 N/A N/A N/A
ENSMUST00000182574 N/A N/A N/A 2.733±0.00 N/A N/A N/A N/A N/A N/A N/A 3.437±1.33 69.316±46.86 25.909±0.00
ENSMUST00000182775 N/A N/A N/A N/A N/A 0.347±0.00 N/A 0.151±0.02 0.352±0.27 N/A 0.165±0.00 N/A N/A N/A
ENSMUST00000182814 1.020±0.83 0.406±0.22 0.679±0.00 0.294±0.08 4.197±2.77 0.465±0.08 0.198±0.09 0.367±0.21 0.454±0.19 1.514±0.12 0.046±0.02 0.638±0.10 N/A N/A
ENSMUST00000183193 0.861±0.00 0.999±0.06 N/A N/A 4.465±1.24 2.298±0.58 N/A N/A 0.894±0.00 N/A 0.102±0.00 N/A N/A N/A
ENSMUST00000183211 0.635±0.03 N/A 0.980±0.38 0.940±0.83 3.690±1.67 0.806±0.00 0.403±0.01 0.757±0.31 11.335±7.08 2.668±0.59 0.875±0.00 1.013±0.33 28.607±19.16 7.414±0.79

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