C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bridging integrator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183211 Bin2-001 ENSMUSG00000098112 10090 - 15:100641077-100669553 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000183211
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000183211 0.635±0.03 0.980±0.38 0.940±0.83 3.690±1.67 0.806±0.00 0.403±0.01 0.757±0.31 11.335±7.08 2.668±0.59 0.875±0.00 1.013±0.33 28.607±19.16 7.414±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003K2 CIL_0003K2_0002 CGP 15:100621342-100669553
CIL_0006JT CIL_0006JT_0002 CGP 15:100641077-100687920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001891 IEA phagocytic cup
GO:0002102 IEA podosome
GO:0005543 IEA phospholipid binding
GO:0005737 IEA cytoplasm
GO:0006911 IEA phagocytosis, engulfment
GO:0060326 IEA cell chemotaxis
GO:0071800 IEA podosome assembly
GO:0097320 IEA membrane tubulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267012 BIN2-201 protein_coding Homo_sapiens 0 1048
ENST00000452142 BIN2-004 protein_coding Homo_sapiens 0 453
ENST00000503900 BIN2P2-001 processed_pseudogene Homo_sapiens 0 427
ENST00000504996 BIN2P1-001 processed_pseudogene Homo_sapiens 0 595
ENST00000544402 BIN2-002 protein_coding Homo_sapiens 0 917
ENST00000604560 BIN2-005 protein_coding Homo_sapiens 0 813
ENST00000605039 BIN2-003 retained_intron Homo_sapiens 0 453
ENST00000605423 BIN2-010 nonsense_mediated_decay Homo_sapiens 0 193
ENST00000615107 BIN2-001 protein_coding Homo_sapiens 0 1048

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