C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 28230
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000100642 HOXD3 10090 + 2:74726728-74747918 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053932 HOXD3-001 74726728-74747918 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000053932
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000053932 4.022±1.86 3.482±0.26 6.860±0.33 1.570±0.48 1.064±0.33 0.078±0.02 4.344±0.88 0.013±0.01 0.095±0.02 0.212±0.06 5.706±1.66 0.612±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0002 UCNEbase 2:73834549-75665799
CIL_00090A CIL_00090A_0002 VISTA 2:74189927-74791300
CIL_0008JZ CIL_0008JZ_0002 VISTA 2:74350860-74952235
CIL_00017M CIL_00017M_0002 CGP 2:74704615-74748442
CIL_0006SE CIL_0006SE_0002 CGP 2:74711927-74748442

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000278500 HOXD3 protein_coding Homo_sapiens

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