C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00000Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104450-ENSG00000034677 CGP 9606 8:100157906-100410015
GeneTranscriptPositionBiotype
ENSG00000034677 (RNF19A)
ring finger protein 19A, RBR E3 ubiquitin protein ligase 		ENST00000341084 (RNF19A-001) 100257342-100310327 protein_coding
ENST00000432381 (RNF19A-004) 100287907-100303230 protein_coding
ENST00000517584 (RNF19A-002) 100287907-100303230 protein_coding
ENST00000519342 (RNF19A-011) 100300578-100310148 processed_transcript
ENST00000519449 (RNF19A-003) 100257060-100303259 protein_coding
ENST00000519527 (RNF19A-009) 100287678-100336185 protein_coding
ENST00000520071 (RNF19A-005) 100261723-100264580 retained_intron
ENST00000520903 (RNF19A-006) 100258885-100260040 retained_intron
ENST00000522182 (RNF19A-008) 100300543-100336218 processed_transcript
ENST00000522369 (RNF19A-010) 100287835-100336204 protein_coding
ENST00000523167 (RNF19A-012) 100287705-100309526 protein_coding
ENST00000523255 (RNF19A-007) 100259063-100268920 processed_transcript
ENST00000523481 (RNF19A-015) 100288131-100309910 protein_coding
ENST00000523644 (RNF19A-014) 100259164-100264080 processed_transcript
ENST00000524233 (RNF19A-013) 100268604-100275034 retained_intron
ENST00000616528 (RNF19A-201) 100257059-100410015 protein_coding
ENSG00000104450 (SPAG1)
sperm associated antigen 1 		ENST00000251809 (SPAG1-201) 100158035-100241903 protein_coding
ENST00000388798 (SPAG1-001) 100158428-100241902 protein_coding
ENST00000519409 (SPAG1-003) 100240559-100259278 processed_transcript
ENST00000519424 (SPAG1-005) 100233171-100240515 retained_intron
ENST00000520508 (SPAG1-004) 100158335-100194684 protein_coding
ENST00000520643 (SPAG1-002) 100157906-100194680 protein_coding
ENST00000523302 (SPAG1-006) 100213087-100231284 processed_transcript
ENSG00000202310 (Y_RNA)
Y RNA 		ENST00000365440 (Y_RNA.1-555) 100158868-100158975 misc_RNA
ENSG00000253217 (KB-1991G8.1)
 ENST00000519566 (KB-1991G8.1-001) 100337595-100350707 lincRNA
ENSG00000253299 (RP11-316J7.4)
 ENST00000517879 (RP11-316J7.4-001) 100165226-100165478 processed_pseudogene
ENSG00000253824 (KB-173C10.2)
 ENST00000519844 (KB-173C10.2-001) 100381260-100414459 lincRNA
ENST00000523870 (KB-173C10.2-002) 100381474-100396213 lincRNA
CIL_00000Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037617-ENSMUSG00000022280 CGP 10090 15:36179368-36283147
GeneTranscriptPositionBiotype
ENSMUSG00000022280 (Rnf19a)
ring finger protein 19A 		ENSMUST00000022890 (Rnf19a-201) 36239934-36283147 protein_coding
ENSMUSG00000037617 (Spag1)
sperm associated antigen 1 		ENSMUST00000047348 (Spag1-201) 36179368-36235610 protein_coding
ENSMUST00000171205 (Spag1-202) 36179530-36235161 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000Q_0001ENSG00000034677ENST00000341084ENST00000432381ENST00000517584ENST00000519342ENST00000519449ENST00000519527ENST00000520071ENST00000520903ENST00000522182ENST00000522369ENST00000523167ENST00000523255ENST00000523481ENST00000523644ENST00000524233ENST00000616528ENSG00000104450ENST00000251809ENST00000388798ENST00000519409ENST00000519424ENST00000520508ENST00000520643ENST00000523302ENSG00000202310ENST00000365440ENSG00000253217ENST00000519566ENSG00000253299ENST00000517879ENSG00000253824ENST00000519844ENST00000523870CIL_00000Q_0002ENSMUSG00000022280ENSMUST00000022890ENSMUSG00000037617ENSMUST00000047348ENSMUST00000171205
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000Q_0001ENSG00000034677ENST00000341084ENST00000519449ENST00000616528ENSG00000104450ENST00000251809ENST00000388798ENSG00000202310ENST00000365440ENSG00000253217ENST00000519566ENSG00000253299ENST00000517879ENSG00000253824ENST00000519844ENST00000523870CIL_00000Q_0002ENSMUSG00000022280ENSMUST00000022890ENSMUSG00000037617ENSMUST00000047348ENSMUST00000171205
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000034677 ENST00000341084 2.966±0.00 3.605±0.00 2.234±0.00 3.829±1.48 4.622±0.90 2.742±0.51 2.251±0.61 2.292±0.17 3.892±3.29 4.700±0.26 1.288±0.23 2.719±0.26 1.293±0.34 6.165±0.00
ENST00000432381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519449 N/A N/A N/A 1.361±0.00 N/A 3.028±0.00 N/A 2.134±0.00 N/A N/A 0.896±0.00 N/A N/A N/A
ENST00000519527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616528 5.725±0.00 4.785±0.00 N/A 7.989±1.19 4.405±0.00 4.177±0.00 3.951±0.89 3.301±0.00 4.093±2.98 4.390±1.14 1.048±0.00 8.015±3.71 3.333±1.22 13.597±0.44
ENSG00000104450 ENST00000251809 N/A 2.471±0.00 0.955±0.00 N/A 2.560±0.00 2.890±0.00 N/A 1.064±0.00 0.767±0.00 2.477±0.00 N/A 2.931±0.73 0.809±0.08 N/A
ENST00000388798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.676±3.11
ENST00000519409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202310 ENST00000365440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.170±0.00
ENSG00000253217 ENST00000519566 N/A N/A N/A 0.051±0.00 0.048±0.00 N/A 0.089±0.00 0.286±0.00 N/A 0.061±0.00 N/A N/A N/A 0.198±0.00
ENSG00000253299 ENST00000517879 N/A N/A N/A N/A N/A N/A N/A N/A 1.808±0.00 N/A N/A N/A N/A N/A
ENSG00000253824 ENST00000519844 N/A N/A N/A 0.193±0.00 N/A N/A 0.136±0.00 N/A N/A 0.034±0.00 N/A N/A 0.063±0.00 0.152±0.00
ENST00000523870 N/A N/A N/A 0.315±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022280 ENSMUST00000022890 7.458±1.46 5.994±1.62 10.644±0.17 5.943±3.48 6.209±0.84 4.674±0.91 3.127±0.59 8.553±0.86 10.366±6.30 12.790±0.35 3.521±0.37 12.271±3.12 10.460±2.30 84.087±7.09
ENSMUSG00000037617 ENSMUST00000047348 N/A 0.598±0.14 1.045±0.00 2.489±1.11 0.416±0.00 0.292±0.00 0.319±0.01 0.221±0.07 0.488±0.25 0.484±0.00 0.270±0.05 1.380±0.49 1.090±0.45 6.168±1.52
ENSMUST00000171205 0.309±0.12 0.543±0.15 1.195±0.18 3.021±1.96 0.234±0.16 0.346±0.12 N/A 0.328±0.00 0.224±0.11 0.340±0.09 0.142±0.03 2.197±1.48 1.887±1.58 8.148±8.74

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