C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 19A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022890 Rnf19a-201 ENSMUSG00000022280 10090 - 15:36239934-36283147 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022890
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022890 7.458±1.46 5.994±1.62 10.644±0.17 5.943±3.48 6.209±0.84 4.674±0.91 3.127±0.59 8.553±0.86 10.366±6.30 12.790±0.35 3.521±0.37 12.271±3.12 10.460±2.30 84.087±7.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000Q CIL_00000Q_0002 CGP 15:36179368-36283147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341084 RNF19A-001 protein_coding Homo_sapiens 0 3548
ENST00000519449 RNF19A-003 protein_coding Homo_sapiens 0 3506
ENST00000519527 RNF19A-009 protein_coding Homo_sapiens 0 701
ENST00000520903 RNF19A-006 retained_intron Homo_sapiens 0 656
ENST00000522369 RNF19A-010 protein_coding Homo_sapiens 0 472
ENST00000523167 RNF19A-012 protein_coding Homo_sapiens 0 662
ENST00000523255 RNF19A-007 processed_transcript Homo_sapiens 0 673
ENST00000524233 RNF19A-013 retained_intron Homo_sapiens 0 521
ENST00000616528 RNF19A-201 protein_coding Homo_sapiens 0 3506

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