C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaphilin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614659 SNPH-201 ENSG00000101298 9606 + 20:1295774-1309325 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartMuscleOvaryPlacentaENST00000614659
Transcript ID Adrenal Brain Heart Muscle Ovary Placenta
ENST00000614659 0.510±0.00 4.824±2.30 0.477±0.18 0.176±0.00 0.814±0.03 0.156±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000011 CIL_000011_0002 CGP 20:1226056-1309328
CIL_000012 CIL_000012_0002 CGP 20:1266316-1329239

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005881 IDA cytoplasmic microtubule
GO:0007269 NAS neurotransmitter secretion
GO:0016021 IEA integral component of membrane
GO:0016081 NAS synaptic vesicle docking involved in exocytosis
GO:0017075 NAS syntaxin-1 binding
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094456 Snph-002 protein_coding Mus_musculus 0 1777
ENSMUST00000109875 Snph-006 protein_coding Mus_musculus 0 1687
ENSMUST00000028951 Snph-001 protein_coding Mus_musculus 0 1687
ENSMUST00000109877 Snph-005 protein_coding Mus_musculus 0 1530

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