C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor coactivator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000288599 NCOA1-201 ENSG00000084676 9606 + 2:24584477-24770702 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000288599
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000288599 2.894±0.00 3.472±0.00 5.889±1.95 3.784±0.00 2.272±0.00 4.209±0.00 2.369±1.03 2.656±0.81 7.977±0.00 3.085±1.97 3.154±0.62 5.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000025 CIL_000025_0002 CGP 2:24491914-24793382

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000435 IDA positive regulation of transcription from RNA polymerase II promoter by galactose
GO:0000790 IDA nuclear chromatin
GO:0001105 NAS RNA polymerase II transcription coactivator activity
GO:0003713 IDA:IEA transcription coactivator activity
GO:0004402 IEA histone acetyltransferase activity
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IDA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0016573 IEA histone acetylation
GO:0016922 IPI ligand-dependent nuclear receptor binding
GO:0019899 IPI enzyme binding
GO:0030374 IEA:IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030521 NAS androgen receptor signaling pathway
GO:0035257 IEA:IDA nuclear hormone receptor binding
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 NAS positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0047485 IPI protein N-terminus binding
GO:0050681 NAS androgen receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085814 Ncoa1-201 protein_coding Mus_musculus 0 7841

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