C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00002R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075612-ENSDARG00000069329 CGP 7955 13:31097773-31141880
GeneTranscriptPositionBiotype
ENSDARG00000069329 (drgx)
dorsal root ganglia homeobox 		ENSDART00000100795 (drgx-201) 31136011-31141879 protein_coding
ENSDART00000133138 (drgx-001) 31135719-31141880 protein_coding
ENSDARG00000075612 (ercc6)
excision repair cross-complementing rodent repair deficiency, complementation group 6 		ENSDART00000112380 (ercc6-201) 31098700-31133332 protein_coding
ENSDART00000134809 (ercc6-001) 31097773-31132673 protein_coding

Danio rerio Ensembl (Zv9)

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Structures from Ensembl
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CIL_00002R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054051-ENSMUSG00000041730 CGP 10090 14:32513521-32649246
GeneTranscriptPositionBiotype
ENSMUSG00000041730 (Prrxl1)
paired related homeobox protein-like 1 		ENSMUST00000068938 (Prrxl1-004) 32599867-32649246 protein_coding
ENSMUST00000186452 (Prrxl1-003) 32599541-32630302 protein_coding
ENSMUST00000187377 (Prrxl1-001) 32599407-32649204 protein_coding
ENSMUST00000189022 (Prrxl1-002) 32599408-32630326 protein_coding
ENSMUSG00000054051 (Ercc6)
excision repair cross-complementing rodent repair deficiency, complementation group 6 		ENSMUST00000066807 (Ercc6-201) 32513521-32580989 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002R_0001ENSDARG00000069329ENSDART00000100795ENSDART00000133138ENSDARG00000075612ENSDART00000112380ENSDART00000134809CIL_00002R_0002ENSMUSG00000041730ENSMUST00000068938ENSMUST00000186452ENSMUST00000187377ENSMUST00000189022ENSMUSG00000054051ENSMUST00000066807
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002R_0001ENSDARG00000069329ENSDART00000100795ENSDART00000133138ENSDARG00000075612ENSDART00000112380ENSDART00000134809CIL_00002R_0002ENSMUSG00000041730ENSMUST00000068938ENSMUST00000186452ENSMUST00000187377ENSMUST00000189022ENSMUSG00000054051ENSMUST00000066807
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069329 ENSDART00000100795 N/A N/A N/A 0.675±0.00 N/A N/A N/A 0.086±0.00 N/A N/A 0.047±0.00 N/A N/A N/A
ENSDART00000133138 N/A N/A N/A 0.244±0.05 N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075612 ENSDART00000112380 N/A N/A N/A 0.733±0.39 N/A N/A 0.871±0.51 1.560±0.39 N/A N/A 1.037±0.00 N/A N/A N/A
ENSDART00000134809 N/A N/A N/A 1.966±0.00 N/A N/A 0.335±0.10 0.425±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041730 ENSMUST00000068938 N/A N/A N/A N/A 0.026±0.00 0.091±0.00 0.036±0.00 N/A 0.012±0.00 N/A 0.189±0.01 0.008±0.00 0.021±0.00 N/A
ENSMUST00000186452 N/A 0.243±0.15 N/A 0.161±0.00 N/A N/A N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A
ENSMUST00000187377 N/A 0.227±0.15 N/A N/A 0.040±0.00 N/A N/A 0.018±0.00 0.006±0.00 N/A 0.130±0.07 0.018±0.00 0.013±0.01 N/A
ENSMUST00000189022 0.013±0.00 0.523±0.27 N/A 0.525±0.46 0.016±0.00 0.023±0.00 N/A N/A 0.003±0.00 N/A 0.064±0.01 0.041±0.04 N/A 0.013±0.00
ENSMUSG00000054051 ENSMUST00000066807 0.659±0.26 2.054±0.54 1.818±1.49 4.407±2.42 1.890±0.35 1.608±0.83 0.677±0.12 1.980±0.31 1.758±0.82 1.442±0.24 0.670±0.23 2.738±0.84 2.046±1.15 1.935±0.53

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