C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00003C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002330-ENSDARG00000017398 CGP 7955 2:10997100-11259959
GeneTranscriptPositionBiotype
ENSDARG00000002330 (lhx8a)
LIM homeobox 8a 		ENSDART00000019078 (lhx8a-001) 10997100-11001473 protein_coding
ENSDART00000132313 (lhx8a-003) 10999768-11000987 retained_intron
ENSDART00000144982 (lhx8a-002) 10997622-11000053 protein_coding
ENSDARG00000017398 (slc44a5a)
solute carrier family 44, member 5a 		ENSDART00000131229 (slc44a5a-001) 11008119-11259959 protein_coding
ENSDART00000140823 (slc44a5a-002) 11042402-11049683 retained_intron
ENSDARG00000094331 (si:dkey-189n19.3)
si:dkey-189n19.3 		ENSDART00000142873 (si:dkey-189n19.3-001) 11128345-11129288 sense_intronic
ENSDARG00000095190 (si:dkey-189n19.4)
si:dkey-189n19.4 		ENSDART00000137219 (si:dkey-189n19.4-001) 11122029-11122621 sense_intronic
CIL_00003C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162624-ENSG00000137968 CGP 9606 1:75128434-75611116
GeneTranscriptPositionBiotype
ENSG00000137968 (SLC44A5)
solute carrier family 44, member 5 		ENST00000370855 (SLC44A5-002) 75204475-75611084 protein_coding
ENST00000370859 (SLC44A5-001) 75202131-75611116 protein_coding
ENST00000469525 (SLC44A5-003) 75242920-75611096 processed_transcript
ENSG00000162624 (LHX8)
LIM homeobox 8 		ENST00000294638 (LHX8-001) 75128434-75161533 protein_coding
ENST00000356261 (LHX8-002) 75134882-75161533 protein_coding
ENST00000607240 (LHX8-004) 75159288-75161531 retained_intron
ENSG00000224127 (RP11-510C10.2)
 ENST00000446238 (RP11-510C10.2-001) 75127830-75133058 antisense
ENSG00000224149 (RP11-510C10.3)
 ENST00000427892 (RP11-510C10.3-001) 75129974-75132576 antisense
ENSG00000224493 (RP11-87O11.1)
 ENST00000440382 (RP11-87O11.1-001) 75521562-75522231 processed_pseudogene
ENSG00000274200 (AC118550.1)
 ENST00000615006 (AC118550.1-201) 75182616-75182709 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00003C_0001ENSDARG00000002330ENSDART00000019078ENSDART00000132313ENSDART00000144982ENSDARG00000017398ENSDART00000131229ENSDART00000140823ENSDARG00000094331ENSDART00000142873ENSDARG00000095190ENSDART00000137219CIL_00003C_0002ENSG00000137968ENST00000370855ENST00000370859ENST00000469525ENSG00000162624ENST00000294638ENST00000356261ENST00000607240ENSG00000224127ENST00000446238ENSG00000224149ENST00000427892ENSG00000224493ENST00000440382ENSG00000274200ENST00000615006
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00003C_0001ENSDARG00000002330ENSDART00000019078ENSDART00000132313ENSDART00000144982ENSDARG00000017398ENSDART00000131229ENSDARG00000094331ENSDART00000142873ENSDARG00000095190ENSDART00000137219CIL_00003C_0002ENSG00000137968ENST00000370855ENST00000370859ENST00000469525ENSG00000162624ENST00000294638ENST00000356261ENST00000607240ENSG00000224127ENST00000446238ENSG00000224149ENST00000427892ENSG00000224493ENST00000440382ENSG00000274200ENST00000615006
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002330 ENSDART00000019078 N/A N/A N/A 0.807±0.54 N/A N/A 0.115±0.00 4.343±0.75 0.234±0.00 N/A 0.044±0.00 N/A N/A N/A
ENSDART00000132313 N/A N/A N/A 0.353±0.20 N/A N/A 0.117±0.00 N/A 0.212±0.00 N/A N/A N/A N/A N/A
ENSDART00000144982 N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A 0.114±0.00 N/A N/A N/A N/A N/A
ENSDARG00000017398 ENSDART00000131229 N/A N/A N/A 2.002±0.00 N/A N/A 0.073±0.00 0.446±0.25 0.078±0.00 N/A 0.189±0.00 N/A N/A N/A
ENSDART00000140823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000094331 ENSDART00000142873 N/A N/A N/A 1.274±1.23 N/A N/A 1.424±0.92 1.811±0.00 0.095±0.00 N/A 0.451±0.00 N/A N/A N/A
ENSDARG00000095190 ENSDART00000137219 N/A N/A N/A 12.397±3.10 N/A N/A 7.210±0.00 1.428±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137968 ENST00000370855 0.021±0.00 0.260±0.00 0.032±0.00 0.261±0.02 0.122±0.03 0.036±0.00 0.029±0.01 0.109±0.00 0.045±0.04 0.076±0.02 N/A 0.189±0.07 0.128±0.03 0.605±0.28
ENST00000370859 0.044±0.00 0.343±0.00 N/A 0.809±0.00 0.151±0.00 0.020±0.00 0.158±0.00 0.158±0.11 0.050±0.03 0.124±0.04 0.129±0.00 0.108±0.11 0.300±0.22 1.416±0.43
ENST00000469525 N/A N/A 0.146±0.00 N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000162624 ENST00000294638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.167±0.06
ENST00000356261 N/A N/A N/A 0.006±0.00 N/A N/A N/A 0.042±0.00 N/A N/A N/A 0.063±0.04 N/A 0.435±0.16
ENST00000607240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 0.197±0.00
ENSG00000224127 ENST00000446238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.01
ENSG00000224149 ENST00000427892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.00
ENSG00000224493 ENST00000440382 N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A 0.035±0.00
ENSG00000274200 ENST00000615006 N/A 0.383±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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