C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00005W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000272636-ENSG00000181031 CGP 9606 17:142789-386254
GeneTranscriptPositionBiotype
ENSG00000262061 (RP11-1260E13.4)
 ENST00000570711 (RP11-1260E13.4-001) 331205-333488 antisense
ENST00000573601 (RP11-1260E13.4-003) 332142-333444 antisense
ENST00000574432 (RP11-1260E13.4-201) 331205-333485 processed_transcript
ENST00000575743 (RP11-1260E13.4-004) 331234-333485 retained_intron
ENST00000575899 (RP11-1260E13.4-002) 331515-332151 retained_intron
ENSG00000262294 (RP11-1260E13.2)
 ENST00000572499 (RP11-1260E13.2-001) 352638-357581 antisense
ENSG00000262558 (RP11-1260E13.3)
 ENST00000571512 (RP11-1260E13.3-001) 354737-356882 antisense
ENSG00000273172 (AC108004.2)
 ENST00000576171 (AC108004.2-001) 183824-191587 lincRNA
ENSG00000273288 (AC108004.1)
 ENST00000583926 (AC108004.1-201) 155168-155255 miRNA
CIL_00005W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020848-ENSMUSG00000020847 CGP 10090 11:75768966-75938429
GeneTranscriptPositionBiotype
ENSMUSG00000020847 (Rph3al)
rabphilin 3A-like (without C2 domains) 		ENSMUST00000021208 (Rph3al-002) 75899726-75925891 protein_coding
ENSMUST00000066504 (Rph3al-201) 75832137-75911062 protein_coding
ENSMUST00000108420 (Rph3al-003) 75900743-75937697 protein_coding
ENSMUST00000121287 (Rph3al-001) 75830999-75937738 protein_coding
ENSMUST00000152035 (Rph3al-004) 75906572-75938429 protein_coding
ENSMUSG00000020848 (Doc2b)
double C2, beta 		ENSMUST00000021209 (Doc2b-001) 75768966-75796049 protein_coding
ENSMUSG00000087059 (Gm12339)
predicted gene 12339 		ENSMUST00000127424 (Gm12339-001) 75794768-75825223 antisense
ENSMUST00000139361 (Gm12339-002) 75795220-75825241 processed_transcript
ENSMUSG00000087322 (Gm16075)
predicted gene 16075 		ENSMUST00000135873 (Gm16075-001) 75860969-75861494 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00005W_0001ENSG00000262061ENST00000570711ENST00000573601ENST00000574432ENST00000575743ENST00000575899ENSG00000262294ENST00000572499ENSG00000262558ENST00000571512ENSG00000273172ENST00000576171ENSG00000273288ENST00000583926CIL_00005W_0002ENSMUSG00000020847ENSMUST00000021208ENSMUST00000066504ENSMUST00000108420ENSMUST00000121287ENSMUST00000152035ENSMUSG00000020848ENSMUST00000021209ENSMUSG00000087059ENSMUST00000127424ENSMUST00000139361ENSMUSG00000087322ENSMUST00000135873
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00005W_0001ENSG00000262061ENST00000570711ENST00000574432ENST00000575743ENST00000575899ENSG00000262294ENST00000572499ENSG00000262558ENST00000571512ENSG00000273172ENST00000576171ENSG00000273288ENST00000583926CIL_00005W_0002ENSMUSG00000020847ENSMUST00000021208ENSMUST00000066504ENSMUST00000121287ENSMUST00000152035ENSMUSG00000020848ENSMUST00000021209ENSMUSG00000087059ENSMUST00000127424ENSMUST00000139361ENSMUSG00000087322ENSMUST00000135873
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000262061 ENST00000570711 N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A N/A N/A N/A 1.269±0.00 N/A
ENST00000573601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574432 N/A N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A 0.822±0.00 3.591±0.00 N/A N/A
ENST00000575743 N/A 2.241±0.00 N/A 0.175±0.00 N/A N/A 0.738±0.00 N/A 0.143±0.00 N/A N/A 3.824±0.44 0.273±0.00 1.295±0.00
ENST00000575899 N/A N/A N/A 0.725±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262294 ENST00000572499 N/A N/A N/A N/A N/A N/A N/A 6.532±0.00 4.214±0.00 N/A N/A N/A N/A N/A
ENSG00000262558 ENST00000571512 N/A 0.098±0.00 0.450±0.00 0.058±0.00 N/A 0.198±0.02 N/A 0.976±0.00 0.509±0.00 N/A N/A 0.089±0.02 N/A 0.185±0.00
ENSG00000273172 ENST00000576171 0.103±0.00 0.258±0.00 N/A N/A 0.040±0.00 0.133±0.00 N/A N/A N/A 0.114±0.01 0.449±0.00 0.026±0.00 0.083±0.03 1.822±1.74
ENSG00000273288 ENST00000583926 N/A 1.946±0.00 N/A 0.688±0.00 0.675±0.00 0.598±0.00 N/A 1.991±0.00 0.976±0.00 2.482±0.00 N/A 64.936±0.00 N/A 1.492±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020847 ENSMUST00000021208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.302±0.00 N/A N/A
ENSMUST00000066504 1.043±0.47 5.915±0.31 N/A 0.464±0.06 1.214±0.37 4.686±0.00 N/A N/A 0.339±0.20 N/A N/A 7.106±0.95 0.331±0.18 0.415±0.17
ENSMUST00000108420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121287 1.838±1.15 6.134±3.33 1.196±0.02 0.400±0.01 0.764±0.35 3.572±0.69 1.622±0.18 2.141±0.62 0.463±0.24 4.843±0.65 3.292±0.88 7.643±1.67 0.493±0.34 0.504±0.40
ENSMUST00000152035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.519±0.00 1.344±0.00
ENSMUSG00000020848 ENSMUST00000021209 0.594±0.13 4.045±0.94 0.197±0.03 4.512±4.02 0.499±0.20 0.198±0.10 0.091±0.04 0.169±0.03 0.022±0.01 0.123±0.02 0.132±0.06 4.759±1.81 0.152±0.11 0.389±0.10
ENSMUSG00000087059 ENSMUST00000127424 N/A 3.945±0.21 N/A N/A N/A 0.647±0.00 N/A 0.298±0.00 N/A N/A N/A 8.462±1.64 N/A N/A
ENSMUST00000139361 1.881±0.00 3.621±0.93 N/A N/A 1.880±0.00 N/A 0.288±0.00 0.499±0.00 0.126±0.05 0.320±0.11 N/A 8.629±2.47 N/A N/A
ENSMUSG00000087322 ENSMUST00000135873 N/A 0.561±0.39 0.297±0.09 0.302±0.00 N/A 0.291±0.00 0.166±0.01 N/A 0.136±0.00 0.215±0.00 N/A 0.995±0.41 N/A N/A

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