C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rabphilin 3A-like (without C2 domains)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020847 Rph3al 10090 - 11:75830999-75938429 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021208 Rph3al-002 75899726-75925891 protein_coding
  ENSMUST00000066504 Rph3al-201 75832137-75911062 protein_coding
  ENSMUST00000108420 Rph3al-003 75900743-75937697 protein_coding
  ENSMUST00000121287 Rph3al-001 75830999-75937738 protein_coding
  ENSMUST00000152035 Rph3al-004 75906572-75938429 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021208ENSMUST00000066504ENSMUST00000121287ENSMUST00000152035
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.302±0.00 N/A N/A
ENSMUST00000066504 1.043±0.47 5.915±0.31 N/A 0.464±0.06 1.214±0.37 4.686±0.00 N/A N/A 0.339±0.20 N/A N/A 7.106±0.95 0.331±0.18 0.415±0.17
ENSMUST00000121287 1.838±1.15 6.134±3.33 1.196±0.02 0.400±0.01 0.764±0.35 3.572±0.69 1.622±0.18 2.141±0.62 0.463±0.24 4.843±0.65 3.292±0.88 7.643±1.67 0.493±0.34 0.504±0.40
ENSMUST00000152035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.519±0.00 1.344±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005W CIL_00005W_0002 CGP 11:75768966-75938429
CIL_00017J CIL_00017J_0002 CGP 11:75830999-76003569

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0006887 IEA exocytosis
GO:0017137 IEA Rab GTPase binding
GO:0017158 IMP regulation of calcium ion-dependent exocytosis
GO:0030141 IEA secretory granule
GO:0030274 IEA LIM domain binding
GO:0030667 IEA secretory granule membrane
GO:0042493 IEA response to drug
GO:0042593 IMP glucose homeostasis
GO:0045744 IMP negative regulation of G-protein coupled receptor protein signaling pathway
GO:0046872 IEA metal ion binding
GO:0050714 IEA positive regulation of protein secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044290 rph3al rabphilin 3A-like (without C2 domains) protein_coding Danio_rerio
ENSG00000181031 RPH3AL rabphilin 3A-like (without C2 domains) protein_coding Homo_sapiens

Loading