C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00006W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044692-ENSDARG00000044691 CGP 7955 21:18735634-18747809
GeneTranscriptPositionBiotype
ENSDARG00000044691 (ppp1r3b)
protein phosphatase 1, regulatory (inhibitor) subunit 3B 		ENSDART00000065670 (ppp1r3b-001) 18744331-18747809 protein_coding
ENSDART00000137307 (ppp1r3b-002) 18745759-18747793 protein_coding
ENSDART00000142523 (ppp1r3b-003) 18745781-18747808 protein_coding
ENSDART00000147396 (ppp1r3b-004) 18745654-18746895 protein_coding
ENSDARG00000044692 (eri1)
exoribonuclease 1 		ENSDART00000065671 (eri1-001) 18735634-18743896 protein_coding
CIL_00006W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104626-ENSG00000173281 CGP 9606 8:9002147-9151574
GeneTranscriptPositionBiotype
ENSG00000104626 (ERI1)
exoribonuclease 1 		ENST00000250263 (ERI1-201) 9002804-9033339 protein_coding
ENST00000518663 (ERI1-006) 9016332-9116746 processed_transcript
ENST00000519292 (ERI1-005) 9002844-9033338 protein_coding
ENST00000520332 (ERI1-007) 9011663-9100099 processed_transcript
ENST00000520684 (ERI1-003) 9002929-9018300 nonsense_mediated_decay
ENST00000521844 (ERI1-002) 9002891-9008022 nonsense_mediated_decay
ENST00000522258 (ERI1-009) 9049818-9100101 processed_transcript
ENST00000522612 (ERI1-008) 9020413-9100099 processed_transcript
ENST00000523898 (ERI1-001) 9002147-9033341 protein_coding
ENSG00000173281 (PPP1R3B)
protein phosphatase 1, regulatory subunit 3B 		ENST00000310455 (PPP1R3B-001) 9136255-9150696 protein_coding
ENST00000519699 (PPP1R3B-002) 9139563-9151574 protein_coding
ENSG00000197334 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000359385 (Metazoa_SRP.1-202) 9091240-9091508 misc_RNA
ENSG00000239078 (RNU7-55P)
RNA, U7 small nuclear 55 pseudogene 		ENST00000459426 (RNU7-55P-201) 9072455-9072516 snRNA
ENSG00000263407 (MIR4660)
microRNA 4660 		ENST00000583549 (MIR4660-201) 9048445-9048518 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006W_0001ENSDARG00000044691ENSDART00000065670ENSDART00000137307ENSDART00000142523ENSDART00000147396ENSDARG00000044692ENSDART00000065671CIL_00006W_0002ENSG00000104626ENST00000250263ENST00000518663ENST00000519292ENST00000520332ENST00000520684ENST00000521844ENST00000522258ENST00000522612ENST00000523898ENSG00000173281ENST00000310455ENST00000519699ENSG00000197334ENST00000359385ENSG00000239078ENST00000459426ENSG00000263407ENST00000583549
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006W_0001ENSDARG00000044691ENSDART00000065670ENSDART00000142523ENSDART00000147396ENSDARG00000044692ENSDART00000065671CIL_00006W_0002ENSG00000104626ENST00000250263ENST00000519292ENST00000521844ENST00000523898ENSG00000173281ENST00000310455ENST00000519699ENSG00000197334ENST00000359385ENSG00000239078ENST00000459426ENSG00000263407ENST00000583549
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044691 ENSDART00000065670 N/A N/A N/A 0.059±0.00 N/A N/A 0.495±0.26 19.823±5.51 0.647±0.00 N/A 0.097±0.00 N/A N/A N/A
ENSDART00000137307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142523 N/A N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147396 N/A N/A N/A N/A N/A N/A 0.523±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000044692 ENSDART00000065671 N/A N/A N/A 3.914±0.52 N/A N/A 2.886±1.77 6.247±2.33 1.470±0.00 N/A 3.332±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104626 ENST00000250263 2.497±0.00 1.597±0.00 0.515±0.00 0.501±0.10 2.009±0.13 1.296±0.12 0.551±0.13 1.495±0.14 1.326±0.39 1.488±0.47 0.361±0.19 1.916±0.33 2.968±1.08 5.074±0.00
ENST00000518663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519292 2.088±0.00 1.800±0.00 N/A 0.703±0.00 1.662±0.00 1.096±0.00 0.551±0.00 1.193±0.00 0.411±0.00 0.692±0.00 N/A 1.367±0.50 1.629±0.61 4.894±1.74
ENST00000520332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521844 N/A N/A N/A 1.287±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.347±0.00
ENSG00000173281 ENST00000310455 13.859±0.00 7.754±0.00 1.556±0.00 N/A 5.756±1.44 5.213±2.59 5.615±2.64 4.545±2.27 12.490±0.00 4.866±2.11 9.026±1.65 3.912±1.56 4.569±0.38 7.353±4.70
ENST00000519699 N/A N/A N/A N/A N/A N/A 1.511±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000197334 ENST00000359385 0.250±0.00 0.455±0.00 N/A 0.072±0.00 0.404±0.00 N/A 0.308±0.00 0.135±0.00 N/A 0.312±0.00 N/A 1.521±1.37 N/A 0.240±0.06
ENSG00000239078 ENST00000459426 2.542±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263407 ENST00000583549 N/A 1.389±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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