C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00006X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079104-ENSDARG00000044692 CGP 7955 21:18696169-18743896
GeneTranscriptPositionBiotype
ENSDARG00000044692 (eri1)
exoribonuclease 1 		ENSDART00000065671 (eri1-001) 18735634-18743896 protein_coding
CIL_00006X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147324-ENSG00000104626 CGP 9606 8:8783354-9116746
GeneTranscriptPositionBiotype
ENSG00000104626 (ERI1)
exoribonuclease 1 		ENST00000250263 (ERI1-201) 9002804-9033339 protein_coding
ENST00000518663 (ERI1-006) 9016332-9116746 processed_transcript
ENST00000519292 (ERI1-005) 9002844-9033338 protein_coding
ENST00000520332 (ERI1-007) 9011663-9100099 processed_transcript
ENST00000520684 (ERI1-003) 9002929-9018300 nonsense_mediated_decay
ENST00000521844 (ERI1-002) 9002891-9008022 nonsense_mediated_decay
ENST00000522258 (ERI1-009) 9049818-9100101 processed_transcript
ENST00000522612 (ERI1-008) 9020413-9100099 processed_transcript
ENST00000523898 (ERI1-001) 9002147-9033341 protein_coding
ENSG00000147324 (MFHAS1)
malignant fibrous histiocytoma amplified sequence 1 		ENST00000276282 (MFHAS1-001) 8783354-8893645 protein_coding
ENST00000520091 (MFHAS1-003) 8786025-8822135 processed_transcript
ENST00000520715 (MFHAS1-004) 8785784-8821864 processed_transcript
ENST00000521881 (MFHAS1-002) 8785759-8860031 processed_transcript
ENSG00000197334 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000359385 (Metazoa_SRP.1-202) 9091240-9091508 misc_RNA
ENSG00000233609 (RP11-62H7.2)
 ENST00000519013 (RP11-62H7.2-001) 8961757-8962057 transcribed_processed_pseudogene
ENST00000520582 (RP11-62H7.2-003) 8961200-8963788 processed_transcript
ENST00000522289 (RP11-62H7.2-002) 8961910-8979025 processed_transcript
ENSG00000239078 (RNU7-55P)
RNA, U7 small nuclear 55 pseudogene 		ENST00000459426 (RNU7-55P-201) 9072455-9072516 snRNA
ENSG00000263407 (MIR4660)
microRNA 4660 		ENST00000583549 (MIR4660-201) 9048445-9048518 miRNA
ENSG00000270966 (RP11-62H7.3)
 ENST00000603391 (RP11-62H7.3-001) 8933721-8934006 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006X_0001ENSDARG00000044692ENSDART00000065671CIL_00006X_0002ENSG00000104626ENST00000250263ENST00000518663ENST00000519292ENST00000520332ENST00000520684ENST00000521844ENST00000522258ENST00000522612ENST00000523898ENSG00000147324ENST00000276282ENST00000520091ENST00000520715ENST00000521881ENSG00000197334ENST00000359385ENSG00000233609ENST00000519013ENST00000520582ENST00000522289ENSG00000239078ENST00000459426ENSG00000263407ENST00000583549ENSG00000270966ENST00000603391
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006X_0001ENSDARG00000044692ENSDART00000065671CIL_00006X_0002ENSG00000104626ENST00000250263ENST00000519292ENST00000521844ENST00000523898ENSG00000147324ENST00000276282ENSG00000197334ENST00000359385ENSG00000233609ENST00000519013ENST00000520582ENST00000522289ENSG00000239078ENST00000459426ENSG00000263407ENST00000583549ENSG00000270966ENST00000603391
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044692 ENSDART00000065671 N/A N/A N/A 3.914±0.52 N/A N/A 2.886±1.77 6.247±2.33 1.470±0.00 N/A 3.332±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104626 ENST00000250263 2.497±0.00 1.597±0.00 0.515±0.00 0.501±0.10 2.009±0.13 1.296±0.12 0.551±0.13 1.495±0.14 1.326±0.39 1.488±0.47 0.361±0.19 1.916±0.33 2.968±1.08 5.074±0.00
ENST00000518663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519292 2.088±0.00 1.800±0.00 N/A 0.703±0.00 1.662±0.00 1.096±0.00 0.551±0.00 1.193±0.00 0.411±0.00 0.692±0.00 N/A 1.367±0.50 1.629±0.61 4.894±1.74
ENST00000520332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521844 N/A N/A N/A 1.287±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.347±0.00
ENSG00000147324 ENST00000276282 3.050±0.00 4.171±0.00 1.656±0.00 3.239±2.09 1.525±0.23 3.422±1.04 2.484±1.52 3.484±1.98 1.678±0.06 4.031±1.58 0.958±0.37 4.574±0.63 3.697±0.83 4.540±1.43
ENST00000520091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197334 ENST00000359385 0.250±0.00 0.455±0.00 N/A 0.072±0.00 0.404±0.00 N/A 0.308±0.00 0.135±0.00 N/A 0.312±0.00 N/A 1.521±1.37 N/A 0.240±0.06
ENSG00000233609 ENST00000519013 0.052±0.00 N/A N/A N/A 0.056±0.00 N/A 0.046±0.00 N/A N/A N/A 0.045±0.00 0.226±0.00 N/A N/A
ENST00000520582 N/A 0.209±0.00 N/A 0.446±0.00 N/A 0.133±0.03 0.244±0.00 0.643±0.00 0.122±0.00 0.595±0.13 N/A 0.515±0.11 0.118±0.02 0.144±0.06
ENST00000522289 N/A N/A N/A 0.037±0.00 0.035±0.00 N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A 0.051±0.00
ENSG00000239078 ENST00000459426 2.542±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263407 ENST00000583549 N/A 1.389±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270966 ENST00000603391 0.052±0.00 N/A N/A 0.224±0.00 0.054±0.00 0.152±0.00 N/A N/A 0.050±0.00 N/A N/A N/A N/A 0.049±0.00

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