C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071703 Zcchc6-201 ENSMUSG00000035248 10090 - 13:59771879-59823147 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071703
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071703 5.813±3.47 3.751±0.35 5.190±0.03 9.963±0.84 5.201±2.01 6.135±2.59 2.750±0.90 4.810±1.87 10.773±4.69 6.347±1.54 1.998±1.56 6.341±1.81 7.304±4.76 5.024±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007D CIL_00007D_0003 CGP 13:59755409-59823147
CIL_0000YF CIL_0000YF_0002 CGP 13:59771879-60177365

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0031123 IEA RNA 3'-end processing
GO:0044822 IEA poly(A) RNA binding
GO:0050265 IEA RNA uridylyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277141 ZCCHC6-003 protein_coding Homo_sapiens 0 1925
ENST00000375947 ZCCHC6-006 protein_coding Homo_sapiens 0 536
ENST00000375948 ZCCHC6-005 protein_coding Homo_sapiens 0 479
ENST00000375957 ZCCHC6-002 protein_coding Homo_sapiens 0 1000
ENST00000375960 ZCCHC6-004 protein_coding Homo_sapiens 0 1360
ENST00000375963 ZCCHC6-001 protein_coding Homo_sapiens 0 2039

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