C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, subfamily H (eag-related), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041415 Kcnh3-201 ENSMUSG00000037579 10090 + 15:99224976-99242817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041415
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041415 1.401±1.06 0.539±0.20 0.065±0.00 20.959±18.88 0.402±0.21 12.003±1.29 0.109±0.05 0.146±0.03 0.051±0.05 1.422±0.22 0.035±0.00 3.961±1.70 0.065±0.04 0.295±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009M CIL_00009M_0002 CGP 15:99126578-99242817
CIL_00009P CIL_00009P_0002 CGP 15:99224976-99251961

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005887 IBA integral component of plasma membrane
GO:0023014 IEA signal transduction by phosphorylation
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042391 IBA regulation of membrane potential
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000153763 KCNH4 (2 of 2)-001 protein_coding Danio_rerio 0 329
ENSDART00000090810 kcnh8-001 protein_coding Danio_rerio 0 279
ENST00000257981 KCNH3-001 protein_coding Homo_sapiens 0 3995
ENST00000262186 KCNH2-001 protein_coding Homo_sapiens 0.00002 57
ENST00000264661 KCNH4-001 protein_coding Homo_sapiens 1e-37 163
ENST00000328405 KCNH8-001 protein_coding Homo_sapiens 1e-28 134
ENST00000430723 KCNH2-201 protein_coding Homo_sapiens 0.00001 57
ENST00000452398 KCNH8-002 nonsense_mediated_decay Homo_sapiens 1e-28 134
ENST00000532957 KCNH2-002 retained_intron Homo_sapiens 0.00002 57
ENST00000548675 KCNH3-004 retained_intron Homo_sapiens 0 534
ENST00000550434 KCNH3-002 processed_transcript Homo_sapiens 0 710
ENST00000607371 KCNH4-002 protein_coding Homo_sapiens 1e-37 163

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