C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000A4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167680-ENSG00000185361 CGP 9606 19:4542593-4655568
GeneTranscriptPositionBiotype
ENSG00000074842 (C19orf10)
chromosome 19 open reading frame 10 		ENST00000262947 (C19orf10-001) 4657545-4670370 protein_coding
ENST00000596031 (C19orf10-002) 4660580-4668696 retained_intron
ENST00000599630 (C19orf10-004) 4659688-4670362 protein_coding
ENST00000599761 (C19orf10-003) 4641374-4664906 protein_coding
ENSG00000167680 (SEMA6B)
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 		ENST00000586582 (SEMA6B-001) 4542593-4559808 protein_coding
ENST00000586965 (SEMA6B-002) 4542914-4558457 protein_coding
ENST00000589889 (SEMA6B-007) 4545790-4546469 retained_intron
ENSG00000185361 (TNFAIP8L1)
tumor necrosis factor, alpha-induced protein 8-like 1 		ENST00000327473 (TNFAIP8L1-001) 4639518-4655568 protein_coding
ENST00000536716 (TNFAIP8L1-201) 4640017-4655568 protein_coding
ENST00000598107 (TNFAIP8L1-002) 4639537-4642482 processed_transcript
ENSG00000267408 (CTB-50L17.2)
 ENST00000592027 (CTB-50L17.2-001) 4621194-4622307 unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0000A4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001227-ENSMUSG00000044469 CGP 10090 17:56123085-56173955
GeneTranscriptPositionBiotype
ENSMUSG00000001227 (Sema6b)
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 		ENSMUST00000001256 (Sema6b-201) 56123085-56140343 protein_coding
ENSMUST00000167545 (Sema6b-202) 56123085-56133852 protein_coding
ENSMUSG00000044469 (Tnfaip8l1)
tumor necrosis factor, alpha-induced protein 8-like 1 		ENSMUST00000077788 (Tnfaip8l1-001) 56162477-56173955 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000A4_0001ENSG00000074842ENST00000262947ENST00000596031ENST00000599630ENST00000599761ENSG00000167680ENST00000586582ENST00000586965ENST00000589889ENSG00000185361ENST00000327473ENST00000536716ENST00000598107ENSG00000267408ENST00000592027CIL_0000A4_0002ENSMUSG00000001227ENSMUST00000001256ENSMUST00000167545ENSMUSG00000044469ENSMUST00000077788
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000A4_0001ENSG00000074842ENST00000262947ENST00000596031ENSG00000167680ENST00000586582ENST00000586965ENST00000589889ENSG00000185361ENST00000327473ENSG00000267408ENST00000592027CIL_0000A4_0002ENSMUSG00000001227ENSMUST00000001256ENSMUST00000167545ENSMUSG00000044469ENSMUST00000077788
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074842 ENST00000262947 72.324±0.00 108.332±0.00 2.066±0.00 24.354±16.98 29.002±22.52 40.925±31.85 8.920±7.47 51.495±39.66 105.174±100.86 49.174±43.68 8.050±4.57 59.121±31.66 103.142±22.31 57.380±27.57
ENST00000596031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.761±0.00 N/A N/A N/A
ENST00000599630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167680 ENST00000586582 19.422±0.00 22.170±0.00 N/A 14.513±12.35 2.089±2.00 5.652±5.61 6.105±0.00 5.095±0.00 2.930±0.00 4.181±3.92 0.763±0.00 3.690±4.10 7.551±2.68 2.526±2.00
ENST00000586965 8.328±0.00 6.856±0.00 N/A 14.129±0.00 0.479±0.00 0.337±0.00 1.346±0.74 0.644±0.00 0.428±0.00 N/A 0.222±0.00 1.556±0.06 3.789±0.95 0.851±0.00
ENST00000589889 N/A N/A N/A N/A N/A 0.260±0.00 N/A N/A N/A N/A N/A 0.736±0.00 N/A N/A
ENSG00000185361 ENST00000327473 7.991±0.00 12.853±0.00 0.470±0.00 3.345±1.79 2.760±2.03 6.696±5.87 1.532±1.27 3.763±0.03 6.757±5.91 6.739±5.70 1.017±0.85 6.172±2.99 6.530±1.07 4.436±0.09
ENST00000536716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267408 ENST00000592027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A 0.078±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001227 ENSMUST00000001256 3.465±2.10 4.928±2.50 0.812±0.08 21.152±8.85 2.562±1.19 0.520±0.10 1.311±0.00 0.592±0.24 0.507±0.15 1.370±0.48 0.713±0.46 2.955±1.09 0.581±0.16 0.185±0.09
ENSMUST00000167545 3.205±1.10 4.168±1.50 0.883±0.04 N/A 3.386±0.64 1.537±0.66 1.751±0.37 0.940±0.31 0.819±0.66 3.321±0.41 0.708±0.37 1.498±0.61 1.527±0.64 N/A
ENSMUSG00000044469 ENSMUST00000077788 3.621±0.25 3.402±0.91 0.770±0.00 2.627±1.48 5.946±1.65 6.789±1.61 1.413±0.13 0.921±0.20 6.798±5.24 1.952±0.28 0.344±0.10 4.427±1.78 5.104±2.20 0.121±0.02

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