C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000AG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014954-ENSDARG00000078227 CGP 7955 25:6804194-6982437
GeneTranscriptPositionBiotype
ENSDARG00000014954 (snx33)
sorting nexin 33
ENSDART00000009971 (snx33-002) 6804194-6832727 protein_coding
ENSDART00000132927 (snx33-001) 6824557-6834347 protein_coding
ENSDARG00000078227 (cspg4)
chondroitin sulfate proteoglycan 4
ENSDART00000112782 (cspg4-001) 6860297-6982437 protein_coding
ENSDARG00000087051 (CR354425.1)
ENSDART00000121814 (CR354425.1-201) 6839057-6839149 miRNA
CIL_0000AG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173548-ENSG00000173546 CGP 9606 15:75647906-75712848
GeneTranscriptPositionBiotype
ENSG00000173546 (CSPG4)
chondroitin sulfate proteoglycan 4
ENST00000308508 (CSPG4-001) 75674322-75712848 protein_coding
ENSG00000173548 (SNX33)
sorting nexin 33
ENST00000308527 (SNX33-001) 75647906-75662301 protein_coding
ENST00000569152 (SNX33-002) 75649756-75658630 protein_coding
ENSG00000203392 (CTD-2026K11.6)
ENST00000435356 (CTD-2026K11.6-001) 75678548-75680752 antisense
ENSG00000260892 (CTD-2026K11.1)
ENST00000569467 (CTD-2026K11.1-001) 75676227-75677162 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AG_0001ENSDARG00000014954ENSDART00000009971ENSDART00000132927ENSDARG00000078227ENSDART00000112782ENSDARG00000087051ENSDART00000121814CIL_0000AG_0002ENSG00000173546ENST00000308508ENSG00000173548ENST00000308527ENST00000569152ENSG00000203392ENST00000435356ENSG00000260892ENST00000569467
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AG_0001ENSDARG00000014954ENSDART00000009971ENSDART00000132927ENSDARG00000078227ENSDART00000112782ENSDARG00000087051ENSDART00000121814CIL_0000AG_0002ENSG00000173546ENST00000308508ENSG00000173548ENST00000308527ENST00000569152ENSG00000203392ENST00000435356ENSG00000260892ENST00000569467
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014954 ENSDART00000009971 N/A N/A N/A 0.112±0.01 N/A N/A 0.424±0.07 0.238±0.02 0.017±0.00 N/A 0.163±0.00 N/A N/A N/A
ENSDART00000132927 N/A N/A N/A 0.100±0.00 N/A N/A 0.387±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078227 ENSDART00000112782 N/A N/A N/A 0.362±0.10 N/A N/A 0.497±0.48 0.175±0.00 0.017±0.00 N/A 0.102±0.00 N/A N/A N/A
ENSDARG00000087051 ENSDART00000121814 N/A N/A N/A N/A N/A N/A 19.368±0.00 N/A N/A N/A 14.965±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000173546 ENST00000308508 16.427±0.00 2.750±0.00 0.228±0.00 2.405±2.07 17.386±0.00 10.896±9.34 2.336±1.89 5.003±0.00 3.569±3.44 7.588±6.67 15.663±13.73 3.542±1.06 16.193±5.25 3.995±3.39
ENSG00000173548 ENST00000308527 5.687±0.00 4.139±0.00 1.119±0.00 1.113±0.75 3.630±2.36 4.295±3.70 1.371±0.71 2.318±1.21 2.403±0.66 3.517±2.82 1.137±0.00 6.308±3.13 4.185±0.59 3.141±1.66
ENST00000569152 11.473±0.00 6.782±0.00 N/A N/A 7.272±5.60 4.242±1.71 1.432±0.96 5.924±0.00 3.897±1.99 6.247±4.90 1.232±0.00 7.493±2.87 6.538±1.14 6.952±0.00
ENSG00000203392 ENST00000435356 0.216±0.00 0.884±0.00 N/A 0.504±0.00 0.410±0.02 0.158±0.11 0.106±0.03 0.238±0.11 0.620±0.58 0.300±0.20 0.380±0.28 0.792±0.54 0.111±0.07 0.203±0.11
ENSG00000260892 ENST00000569467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.904±0.00

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