C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000B2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016858-ENSDARG00000042555 CGP 7955 21:3658167-3865025
GeneTranscriptPositionBiotype
ENSDARG00000016858 (smad7)
MAD, mothers against decapentaplegic homolog 7 (Drosophila) 		ENSDART00000009740 (smad7-201) 3658169-3689369 protein_coding
ENSDART00000150975 (smad7-001) 3658167-3659030 protein_coding
ENSDARG00000042555 (dym)
dymeclin 		ENSDART00000062418 (dym-201) 3729172-3857862 protein_coding
ENSDART00000139194 (dym-001) 3760356-3865025 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000B2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101665-ENSG00000141627 CGP 9606 18:48919853-49461347
GeneTranscriptPositionBiotype
ENSG00000101665 (SMAD7)
SMAD family member 7 		ENST00000262158 (SMAD7-001) 48919853-48950711 protein_coding
ENST00000545051 (SMAD7-003) 48920027-48942807 retained_intron
ENST00000585986 (SMAD7-006) 48921501-48942732 processed_transcript
ENST00000586093 (SMAD7-007) 48921534-48948505 protein_coding
ENST00000587336 (SMAD7-004) 48921411-48930182 processed_transcript
ENST00000588190 (SMAD7-008) 48921641-48933722 processed_transcript
ENST00000589634 (SMAD7-005) 48921372-48950424 protein_coding
ENST00000591805 (SMAD7-002) 48920993-48949333 protein_coding
ENSG00000141627 (DYM)
dymeclin 		ENST00000269445 (DYM-001) 49041474-49460802 protein_coding
ENST00000418472 (DYM-011) 49286448-49411941 nonsense_mediated_decay
ENST00000442713 (DYM-002) 49043669-49460665 protein_coding
ENST00000577481 (DYM-005) 49379746-49460638 processed_transcript
ENST00000577734 (DYM-018) 49043804-49097493 protein_coding
ENST00000577836 (DYM-014) 49417939-49460641 processed_transcript
ENST00000578396 (DYM-012) 49321125-49378649 protein_coding
ENST00000578596 (DYM-015) 49363219-49413132 processed_transcript
ENST00000579058 (DYM-019) 49378623-49460627 nonsense_mediated_decay
ENST00000580615 (DYM-013) 49286452-49359872 processed_transcript
ENST00000581409 (DYM-016) 49391610-49460643 processed_transcript
ENST00000581738 (DYM-007) 49286489-49368713 protein_coding
ENST00000582095 (DYM-017) 49391620-49460645 processed_transcript
ENST00000582399 (DYM-003) 49163711-49258408 protein_coding
ENST00000583225 (DYM-009) 49286488-49368697 protein_coding
ENST00000583270 (DYM-021) 49097185-49116189 retained_intron
ENST00000583280 (DYM-008) 49286497-49368707 protein_coding
ENST00000583353 (DYM-006) 49378659-49461347 protein_coding
ENST00000584977 (DYM-004) 49390720-49460714 processed_transcript
ENST00000584983 (DYM-010) 49282168-49368706 protein_coding
ENSG00000263895 (RP11-110H1.9)
 ENST00000583579 (RP11-110H1.9-001) 49431744-49447420 sense_intronic
ENSG00000264269 (RP11-15F12.1)
 ENST00000584252 (RP11-15F12.1-001) 49023703-49048474 antisense
ENSG00000265128 (RP11-15F12.3)
 ENST00000585251 (RP11-15F12.3-001) 49116301-49126479 antisense
ENSG00000266696 (RP11-30L3.2)
 ENST00000577641 (RP11-30L3.2-001) 49205912-49208781 antisense
ENSG00000266905 (RP11-1058N17.1)
 ENST00000587659 (RP11-1058N17.1-001) 48962951-48963941 lincRNA
ENSG00000280335 (RP11-15F12.6)
 ENST00000624037 (RP11-15F12.6-001) 49013106-49013819 TEC

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B2_0001ENSDARG00000016858ENSDART00000009740ENSDART00000150975ENSDARG00000042555ENSDART00000062418ENSDART00000139194CIL_0000B2_0002ENSG00000101665ENST00000262158ENST00000545051ENST00000585986ENST00000586093ENST00000587336ENST00000588190ENST00000589634ENST00000591805ENSG00000141627ENST00000269445ENST00000418472ENST00000442713ENST00000577481ENST00000577734ENST00000577836ENST00000578396ENST00000578596ENST00000579058ENST00000580615ENST00000581409ENST00000581738ENST00000582095ENST00000582399ENST00000583225ENST00000583270ENST00000583280ENST00000583353ENST00000584977ENST00000584983ENSG00000263895ENST00000583579ENSG00000264269ENST00000584252ENSG00000265128ENST00000585251ENSG00000266696ENST00000577641ENSG00000266905ENST00000587659ENSG00000280335ENST00000624037
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B2_0001ENSDARG00000016858ENSDART00000009740ENSDART00000150975ENSDARG00000042555ENSDART00000062418ENSDART00000139194CIL_0000B2_0002ENSG00000101665ENST00000262158ENST00000545051ENST00000585986ENST00000586093ENST00000588190ENST00000589634ENST00000591805ENSG00000141627ENST00000269445ENST00000418472ENST00000442713ENST00000583270ENST00000584983ENSG00000263895ENST00000583579ENSG00000264269ENST00000584252ENSG00000265128ENST00000585251ENSG00000266696ENST00000577641ENSG00000266905ENST00000587659ENSG00000280335ENST00000624037
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016858 ENSDART00000009740 N/A N/A N/A 4.042±3.05 N/A N/A 4.458±1.02 3.168±2.43 0.640±0.00 N/A 7.128±0.00 N/A N/A N/A
ENSDART00000150975 N/A N/A N/A 4.127±1.48 N/A N/A 4.292±0.95 12.508±0.00 0.434±0.00 N/A N/A N/A N/A N/A
ENSDARG00000042555 ENSDART00000062418 N/A N/A N/A 1.934±0.00 N/A N/A 0.772±0.20 2.992±0.00 N/A N/A 0.478±0.00 N/A N/A N/A
ENSDART00000139194 N/A N/A N/A 0.392±0.10 N/A N/A 0.833±0.00 N/A 0.147±0.00 N/A 0.459±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101665 ENST00000262158 N/A 2.193±0.00 0.616±0.00 0.554±0.01 N/A 2.570±0.00 0.207±0.00 1.519±0.65 0.637±0.00 2.564±0.38 2.088±0.00 3.260±0.91 3.353±1.11 N/A
ENST00000545051 5.046±0.00 4.356±0.00 N/A 0.580±0.00 2.344±0.00 N/A N/A 2.169±0.00 0.541±0.00 N/A N/A 4.164±2.52 6.034±4.29 1.379±0.36
ENST00000585986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.997±0.00 N/A N/A
ENST00000586093 N/A N/A N/A N/A N/A N/A N/A N/A 2.246±0.00 N/A N/A N/A N/A N/A
ENST00000587336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588190 N/A N/A N/A N/A 2.878±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589634 N/A N/A 1.001±0.00 0.871±0.00 2.229±0.00 1.209±0.00 N/A N/A 2.572±0.00 N/A N/A N/A N/A N/A
ENST00000591805 6.823±0.00 N/A 1.843±0.00 1.348±0.57 4.870±0.00 2.614±1.52 0.530±0.00 N/A 1.298±0.45 1.773±0.00 N/A N/A N/A 0.417±0.00
ENSG00000141627 ENST00000269445 4.626±0.00 3.740±0.00 N/A 3.872±2.44 1.636±0.62 1.986±0.00 2.614±1.89 N/A 2.527±2.12 1.248±0.56 4.639±1.45 4.259±3.22 1.682±0.61 4.093±1.94
ENST00000418472 N/A N/A N/A 4.266±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442713 5.078±0.00 2.086±0.00 N/A 3.801±0.00 2.604±0.83 2.953±1.02 3.722±2.02 3.053±1.84 4.369±0.73 4.144±2.74 7.369±4.89 4.646±1.80 3.579±0.59 10.047±0.47
ENST00000577481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.429±0.00
ENST00000583280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.840±0.00 16.205±0.00
ENSG00000263895 ENST00000583579 N/A 0.460±0.00 0.371±0.00 N/A 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.586±0.00
ENSG00000264269 ENST00000584252 N/A N/A 0.152±0.00 N/A N/A 0.048±0.00 0.120±0.00 0.157±0.00 N/A 0.173±0.00 N/A 0.370±0.24 N/A 0.086±0.00
ENSG00000265128 ENST00000585251 N/A 0.119±0.00 N/A N/A N/A N/A N/A 0.171±0.00 0.122±0.00 N/A N/A N/A N/A 0.680±0.31
ENSG00000266696 ENST00000577641 N/A 0.251±0.00 0.565±0.00 0.136±0.00 0.128±0.00 0.040±0.00 0.083±0.00 0.885±0.67 1.030±0.00 N/A N/A 0.750±0.00 N/A 0.271±0.09
ENSG00000266905 ENST00000587659 N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A 0.109±0.00 N/A 0.205±0.00
ENSG00000280335 ENST00000624037 N/A N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A 1.295±0.00 N/A 5.699±3.48 1.178±0.00 N/A

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