C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SMAD family member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586093 SMAD7-007 ENSG00000101665 9606 - 18:48921534-48948505 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000586093
Transcript ID Liver
ENST00000586093 2.246±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P6 CIL_0008P6_0001 VISTA 18:48477632-49083007
CIL_0007UR CIL_0007UR_0001 VISTA 18:48480781-49082143
CIL_0000B3 CIL_0000B3_0002 CGP 18:48539046-48950711
CIL_0000B2 CIL_0000B2_0002 CGP 18:48919853-49461347

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168918 Smad7-201 protein_coding Mus_musculus 0 809
ENSMUST00000026999 Smad7-001 protein_coding Mus_musculus 0 809
ENSMUST00000174411 Smad7-003 protein_coding Mus_musculus 0 808
ENSMUST00000172718 Smad7-004 processed_transcript Mus_musculus 0 416
ENSMUST00000174843 Smad7-002 protein_coding Mus_musculus 0 270

Loading