C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMAD family member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545051 SMAD7-003 ENSG00000101665 9606 - 18:48920027-48942807 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverOvaryPlacentaTestisENST00000545051
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Ovary Placenta Testis
ENST00000545051 5.046±0.00 4.356±0.00 0.580±0.00 2.344±0.00 2.169±0.00 0.541±0.00 4.164±2.52 6.034±4.29 1.379±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P6 CIL_0008P6_0001 VISTA 18:48477632-49083007
CIL_0007UR CIL_0007UR_0001 VISTA 18:48480781-49082143
CIL_0000B3 CIL_0000B3_0002 CGP 18:48539046-48950711
CIL_0000B2 CIL_0000B2_0002 CGP 18:48919853-49461347

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026999 Smad7-001 protein_coding Mus_musculus 0 1027
ENSMUST00000168918 Smad7-201 protein_coding Mus_musculus 0 987
ENSMUST00000174411 Smad7-003 protein_coding Mus_musculus 0 979
ENSMUST00000172718 Smad7-004 processed_transcript Mus_musculus 0 414
ENSMUST00000174843 Smad7-002 protein_coding Mus_musculus 0 270

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