C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000B5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062003-ENSDARG00000069762 CGP 7955 21:21400866-21672413
GeneTranscriptPositionBiotype
ENSDARG00000062003 (myo5b)
myosin VB 		ENSDART00000089030 (myo5b-201) 21400866-21468161 protein_coding
ENSDARG00000069762 (ccdc11)
coiled-coil domain containing 11 		ENSDART00000101771 (ccdc11-201) 21501662-21672413 protein_coding
ENSDART00000129998 (ccdc11-001) 21664323-21672413 protein_coding
ENSDART00000139772 (ccdc11-002) 21667587-21671573 processed_transcript
ENSDARG00000093553 (myo5b)
myosin VB 		ENSDART00000135062 (myo5b-202) 21543010-21560603 protein_coding
ENSDART00000141076 (myo5b-003) 21509147-21518273 protein_coding
ENSDART00000142707 (myo5b-001) 21508915-21662555 protein_coding
ENSDART00000144461 (myo5b-002) 21534012-21536685 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000B5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167306-ENSG00000172361 CGP 9606 18:49822813-50266522
GeneTranscriptPositionBiotype
ENSG00000167306 (MYO5B)
myosin VB 		ENST00000285039 (MYO5B-001) 49822813-50195093 protein_coding
ENST00000324581 (MYO5B-006) 49826260-49902833 protein_coding
ENST00000585859 (MYO5B-008) 49879021-49880496 retained_intron
ENST00000586036 (MYO5B-005) 50040252-50097620 processed_transcript
ENST00000587895 (MYO5B-009) 49863262-49876283 processed_transcript
ENST00000589568 (MYO5B-010) 49877799-49879421 retained_intron
ENST00000592688 (MYO5B-002) 49826290-49849846 protein_coding
ENST00000616031 (MYO5B-201) 49826259-50097618 protein_coding
ENSG00000172361 (CCDC11)
cilia and flagella associated protein 53 		ENST00000398545 (CCDC11-001) 50227193-50266522 protein_coding
ENSG00000267196 (RP11-813F20.4)
 ENST00000591362 (RP11-813F20.4-001) 49969721-49970957 sense_intronic
ENSG00000267511 (ADAD1P2)
adenosine deaminase domain containing 1 (testis-specific) pseudogene 2 		ENST00000588476 (ADAD1P2-001) 50063795-50064440 processed_pseudogene
ENSG00000267591 (RP11-689E3.2)
 ENST00000587055 (RP11-689E3.2-001) 50098742-50099162 processed_pseudogene
ENSG00000277310 (RP11-699C17.1)
 ENST00000616499 (RP11-699C17.1-001) 50256036-50256461 sense_intronic

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B5_0001ENSDARG00000062003ENSDART00000089030ENSDARG00000069762ENSDART00000101771ENSDART00000129998ENSDART00000139772ENSDARG00000093553ENSDART00000135062ENSDART00000141076ENSDART00000142707ENSDART00000144461CIL_0000B5_0002ENSG00000167306ENST00000285039ENST00000324581ENST00000585859ENST00000586036ENST00000587895ENST00000589568ENST00000592688ENST00000616031ENSG00000172361ENST00000398545ENSG00000267196ENST00000591362ENSG00000267511ENST00000588476ENSG00000267591ENST00000587055ENSG00000277310ENST00000616499
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B5_0001ENSDARG00000062003ENSDART00000089030ENSDARG00000069762ENSDART00000101771ENSDART00000129998ENSDARG00000093553ENSDART00000135062ENSDART00000141076ENSDART00000142707CIL_0000B5_0002ENSG00000167306ENST00000285039ENST00000324581ENST00000616031ENSG00000172361ENST00000398545ENSG00000267196ENST00000591362ENSG00000267511ENST00000588476ENSG00000267591ENST00000587055ENSG00000277310ENST00000616499
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062003 ENSDART00000089030 N/A N/A N/A N/A N/A N/A 0.089±0.06 N/A 0.107±0.00 N/A 0.261±0.00 N/A N/A N/A
ENSDARG00000069762 ENSDART00000101771 N/A N/A N/A 0.122±0.09 N/A N/A N/A 0.314±0.00 N/A N/A 0.032±0.00 N/A N/A N/A
ENSDART00000129998 N/A N/A N/A 0.038±0.00 N/A N/A 0.018±0.00 0.410±0.15 N/A N/A N/A N/A N/A N/A
ENSDART00000139772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000093553 ENSDART00000135062 N/A N/A N/A N/A N/A N/A 0.037±0.00 0.166±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000141076 N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142707 N/A N/A N/A 0.211±0.02 N/A N/A 0.010±0.00 0.515±0.00 N/A N/A 0.062±0.00 N/A N/A N/A
ENSDART00000144461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167306 ENST00000285039 N/A N/A N/A 0.552±0.09 N/A 5.542±0.00 N/A 5.068±0.00 N/A 1.882±0.09 N/A 1.477±0.82 0.704±0.02 0.977±0.00
ENST00000324581 N/A N/A 3.163±0.00 N/A N/A N/A N/A N/A N/A 4.906±0.00 N/A 28.329±0.00 4.351±2.25 8.143±3.05
ENST00000585859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616031 N/A N/A 4.424±0.00 N/A N/A N/A N/A N/A N/A 3.036±0.00 N/A N/A N/A N/A
ENSG00000172361 ENST00000398545 0.106±0.00 0.120±0.00 0.123±0.00 0.602±0.41 0.115±0.06 0.132±0.07 0.037±0.02 0.461±0.36 0.087±0.01 2.130±1.82 0.844±0.00 1.541±2.29 0.249±0.15 60.748±30.46
ENSG00000267196 ENST00000591362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.01
ENSG00000267511 ENST00000588476 N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A N/A 0.123±0.00 N/A 0.256±0.00 N/A 0.016±0.00
ENSG00000267591 ENST00000587055 N/A N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A 0.100±0.00 N/A 0.087±0.00 N/A 0.328±0.00
ENSG00000277310 ENST00000616499 0.025±0.00 N/A N/A 0.326±0.00 0.043±0.00 N/A N/A 0.511±0.00 N/A 0.857±0.63 N/A 0.376±0.13 N/A 0.390±0.08

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