C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000BI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055162-ENSDARG00000021905 CGP 7955 16:27848059-27903127
GeneTranscriptPositionBiotype
ENSDARG00000021905 (derl1)
Der1-like domain family, member 1 		ENSDART00000031304 (derl1-001) 27882726-27903127 protein_coding
ENSDART00000128484 (derl1-201) 27883721-27903125 protein_coding
ENSDART00000132136 (derl1-002) 27892976-27902950 processed_transcript
ENSDART00000135893 (derl1-003) 27886797-27903101 retained_intron
ENSDARG00000055162 (zhx2)
zinc-fingers and homeoboxes 2 		ENSDART00000077484 (zhx2-001) 27848059-27882507 protein_coding
CIL_0000BI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178764-ENSG00000136986 CGP 9606 8:122781394-123042423
GeneTranscriptPositionBiotype
ENSG00000136986 (DERL1)
derlin 1 		ENST00000259512 (DERL1-001) 123013164-123042423 protein_coding
ENST00000405944 (DERL1-004) 123014149-123042122 protein_coding
ENST00000419562 (DERL1-002) 123015165-123042302 protein_coding
ENST00000519018 (DERL1-006) 123015442-123025650 protein_coding
ENST00000523036 (DERL1-005) 123015446-123025772 protein_coding
ENST00000524119 (DERL1-003) 123014149-123030719 retained_intron
ENSG00000156787 (TBC1D31)
TBC1 domain family, member 31 		ENST00000287380 (TBC1D31-001) 123072680-123152150 protein_coding
ENST00000327098 (TBC1D31-002) 123072713-123151954 protein_coding
ENST00000518099 (TBC1D31-007) 123072723-123101087 retained_intron
ENST00000518577 (TBC1D31-014) 123109334-123129172 nonsense_mediated_decay
ENST00000518684 (TBC1D31-011) 123074920-123093639 protein_coding
ENST00000518805 (TBC1D31-003) 123100953-123152153 protein_coding
ENST00000518866 (TBC1D31-016) 123127850-123142456 retained_intron
ENST00000519418 (TBC1D31-013) 123072682-123109620 protein_coding
ENST00000520368 (TBC1D31-012) 123041968-123084269 protein_coding
ENST00000521676 (TBC1D31-005) 123072759-123152153 protein_coding
ENST00000521914 (TBC1D31-009) 123093661-123104201 protein_coding
ENST00000521980 (TBC1D31-008) 123082508-123097848 retained_intron
ENST00000522276 (TBC1D31-010) 123073249-123097383 protein_coding
ENST00000522420 (TBC1D31-004) 123072713-123151964 protein_coding
ENST00000524307 (TBC1D31-006) 123072766-123152150 nonsense_mediated_decay
ENSG00000178764 (ZHX2)
zinc fingers and homeoboxes 2 		ENST00000314393 (ZHX2-001) 122781394-122974512 protein_coding
ENST00000534247 (ZHX2-002) 122863385-122952009 protein_coding
ENSG00000253372 (RP11-44N11.1)
 ENST00000521482 (RP11-44N11.1-001) 122807746-122816517 sense_intronic
ENST00000524348 (RP11-44N11.1-002) 122808770-122815774 sense_intronic
ENSG00000259631 (RP11-557C18.4)
 ENST00000559049 (RP11-557C18.4-001) 122977026-122985629 lincRNA
CIL_0000BI_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071757-ENSMUSG00000022365 CGP 10090 15:57694665-57892418
GeneTranscriptPositionBiotype
ENSMUSG00000022365 (Derl1)
Der1-like domain family, member 1 		ENSMUST00000022993 (Derl1-201) 57869502-57892418 protein_coding
ENSMUSG00000047807 (9330154K18Rik)
RIKEN cDNA 9330154K18 gene 		ENSMUST00000176703 (9330154K18Rik-003) 57736563-57738666 antisense
ENSMUSG00000071757 (Zhx2)
zinc fingers and homeoboxes 2 		ENSMUST00000096430 (Zhx2-001) 57694665-57839832 protein_coding
ENSMUST00000160990 (Zhx2-002) 57695729-57821110 processed_transcript
ENSMUSG00000090002 (Gm16006)
predicted gene 16006 		ENSMUST00000160938 (Gm16006-001) 57708114-57708927 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000BI_0001ENSDARG00000021905ENSDART00000031304ENSDART00000128484ENSDART00000132136ENSDART00000135893ENSDARG00000055162ENSDART00000077484CIL_0000BI_0002ENSG00000136986ENST00000259512ENST00000405944ENST00000419562ENST00000519018ENST00000523036ENST00000524119ENSG00000156787ENST00000287380ENST00000327098ENST00000518099ENST00000518577ENST00000518684ENST00000518805ENST00000518866ENST00000519418ENST00000520368ENST00000521676ENST00000521914ENST00000521980ENST00000522276ENST00000522420ENST00000524307ENSG00000178764ENST00000314393ENST00000534247ENSG00000253372ENST00000521482ENST00000524348ENSG00000259631ENST00000559049CIL_0000BI_0003ENSMUSG00000022365ENSMUST00000022993ENSMUSG00000047807ENSMUST00000176703ENSMUSG00000071757ENSMUST00000096430ENSMUST00000160990ENSMUSG00000090002ENSMUST00000160938
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000BI_0001ENSDARG00000021905ENSDART00000031304ENSDART00000128484ENSDARG00000055162ENSDART00000077484CIL_0000BI_0002ENSG00000136986ENST00000259512ENST00000405944ENST00000524119ENSG00000156787ENST00000287380ENST00000518805ENST00000522420ENSG00000178764ENST00000314393ENST00000534247ENSG00000253372ENST00000521482ENST00000524348ENSG00000259631ENST00000559049CIL_0000BI_0003ENSMUSG00000022365ENSMUST00000022993ENSMUSG00000047807ENSMUST00000176703ENSMUSG00000071757ENSMUST00000096430ENSMUSG00000090002ENSMUST00000160938
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021905 ENSDART00000031304 N/A N/A N/A 12.800±3.17 N/A N/A 18.408±11.06 22.581±9.99 3.246±0.00 N/A 13.476±0.00 N/A N/A N/A
ENSDART00000128484 N/A N/A N/A 5.634±0.81 N/A N/A 5.132±0.04 10.472±0.00 2.751±0.00 N/A N/A N/A N/A N/A
ENSDART00000132136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000055162 ENSDART00000077484 N/A N/A N/A 12.487±5.06 N/A N/A 4.029±3.21 3.811±2.32 1.409±0.00 N/A 4.226±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136986 ENST00000259512 N/A 27.532±0.00 N/A 3.107±0.00 N/A 5.337±3.29 1.926±0.00 9.745±6.79 2.615±0.00 N/A N/A 6.656±3.81 4.204±1.87 7.254±0.00
ENST00000405944 18.272±0.00 N/A 2.407±0.00 5.465±1.76 12.093±0.08 5.456±0.78 7.015±3.15 8.743±2.04 11.435±2.58 9.296±3.26 10.819±3.48 12.238±6.10 11.421±5.72 12.288±4.05
ENST00000419562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524119 N/A N/A 0.925±0.00 N/A N/A N/A N/A 1.015±0.00 N/A 1.622±0.00 N/A 1.580±0.00 N/A N/A
ENSG00000156787 ENST00000287380 N/A N/A N/A N/A N/A N/A 0.667±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000327098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.336±0.00
ENST00000518866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522420 N/A N/A 0.624±0.00 1.729±0.00 N/A N/A N/A N/A 1.133±0.00 1.338±0.00 N/A 1.596±0.00 N/A N/A
ENST00000524307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178764 ENST00000314393 3.847±0.00 3.345±0.00 1.051±0.00 1.767±1.50 N/A 0.718±0.00 2.554±1.82 0.912±0.00 0.867±0.28 1.788±0.36 3.468±2.69 2.877±1.54 1.245±0.42 2.454±0.44
ENST00000534247 N/A N/A N/A 0.593±0.00 N/A 0.831±0.00 0.768±0.00 1.161±0.00 N/A 2.226±0.00 N/A N/A 1.917±0.00 N/A
ENSG00000253372 ENST00000521482 0.066±0.00 N/A 1.059±0.00 N/A 0.044±0.00 N/A 0.193±0.00 0.105±0.03 N/A 0.201±0.00 0.020±0.00 N/A N/A 0.076±0.00
ENST00000524348 0.030±0.00 0.115±0.00 N/A 0.356±0.00 0.202±0.00 0.462±0.00 0.410±0.00 0.155±0.00 0.114±0.00 N/A N/A 0.089±0.00 0.053±0.00 0.268±0.04
ENSG00000259631 ENST00000559049 N/A 0.267±0.00 N/A N/A N/A N/A N/A N/A 1.388±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022365 ENSMUST00000022993 90.466±25.78 233.718±50.82 10.834±4.09 9.779±4.72 118.072±43.84 73.009±12.79 24.317±2.77 48.703±17.35 42.689±21.09 61.211±1.59 13.669±3.76 84.816±54.29 28.689±8.70 15.475±9.09
ENSMUSG00000047807 ENSMUST00000176703 0.031±0.02 0.050±0.00 0.065±0.00 0.058±0.01 0.162±0.00 0.038±0.00 N/A 0.059±0.04 0.014±0.01 0.072±0.04 0.028±0.01 0.058±0.05 0.010±0.01 N/A
ENSMUSG00000071757 ENSMUST00000096430 6.640±1.83 6.407±0.49 7.600±1.02 4.565±1.11 8.295±1.03 4.816±0.35 6.355±0.33 6.511±1.54 1.548±1.32 8.546±0.30 5.096±2.28 5.502±1.77 0.750±0.47 0.515±0.19
ENSMUST00000160990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090002 ENSMUST00000160938 0.562±0.17 0.461±0.20 N/A 0.218±0.00 0.785±0.27 0.460±0.17 0.413±0.10 2.454±0.38 0.733±0.55 1.978±0.39 0.172±0.05 0.987±0.43 0.013±0.00 0.726±0.39

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