C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522420 TBC1D31-004 ENSG00000156787 9606 + 8:123072713-123151964 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungOvaryENST00000522420
Transcript ID Bladder Brain Liver Lung Ovary
ENST00000522420 0.624±0.00 1.729±0.00 1.133±0.00 1.338±0.00 1.596±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BI CIL_0000BI_0002 CGP 8:122781394-123042423
CIL_0005HY CIL_0005HY_0001 CGP 8:123013164-123152153
CIL_0005HX CIL_0005HX_0001 CGP 8:123041968-123210079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022992 Tbc1d31-001 protein_coding Mus_musculus 0 2359
ENSMUST00000159801 Tbc1d31-002 retained_intron Mus_musculus 0 2266
ENSMUST00000110175 Tbc1d31-005 processed_transcript Mus_musculus 0 2266
ENSMUST00000160098 Tbc1d31-003 retained_intron Mus_musculus 0 2198
ENSMUST00000162157 Tbc1d31-004 retained_intron Mus_musculus 0 2023
ENSMUST00000159775 Tbc1d31-007 nonsense_mediated_decay Mus_musculus 1e-21 110

Loading