C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: derlin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405944 DERL1-004 ENSG00000136986 9606 - 8:123014149-123042122 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000405944
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000405944 18.272±0.00 2.407±0.00 5.465±1.76 12.093±0.08 5.456±0.78 7.015±3.15 8.743±2.04 11.435±2.58 9.296±3.26 10.819±3.48 12.238±6.10 11.421±5.72 12.288±4.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BI CIL_0000BI_0002 CGP 8:122781394-123042423
CIL_0005HY CIL_0005HY_0001 CGP 8:123013164-123152153

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000836 IDA Hrd1p ubiquitin ligase complex
GO:0004872 NAS receptor activity
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0006986 IMP response to unfolded protein
GO:0016020 IDA membrane
GO:0016021 IDA integral component of membrane
GO:0019060 TAS intracellular transport of viral protein in host cell
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0030433 IDA ER-associated ubiquitin-dependent protein catabolic process
GO:0030968 IDA endoplasmic reticulum unfolded protein response
GO:0030970 IMP retrograde protein transport, ER to cytosol
GO:0042288 IDA MHC class I protein binding
GO:0045184 TAS establishment of protein localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022993 Derl1-201 protein_coding Mus_musculus 0 686

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