C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000D0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040890-ENSDARG00000078125 CGP 7955 16:15758339-15824231
GeneTranscriptPositionBiotype
ENSDARG00000040890 (fdps)
farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) 		ENSDART00000059928 (fdps-002) 15775230-15787126 protein_coding
ENSDART00000122272 (fdps-001) 15775014-15788119 protein_coding
ENSDART00000130353 (fdps-003) 15758339-15787163 protein_coding
ENSDART00000142815 (fdps-004) 15775160-15776584 retained_intron
ENSDART00000156064 (fdps-201) 15775185-15788119 protein_coding
ENSDARG00000078125 (rusc1)
RUN and SH3 domain containing 1 		ENSDART00000114322 (rusc1-201) 15791468-15824231 protein_coding
ENSDART00000132075 (rusc1-002) 15794391-15815917 protein_coding
ENSDART00000135844 (rusc1-004) 15798109-15815944 protein_coding
ENSDART00000146165 (rusc1-001) 15794271-15820297 protein_coding
ENSDARG00000094759 (si:dkey-85k15.7)
si:dkey-85k15.7 		ENSDART00000139130 (si:dkey-85k15.7-001) 15758273-15768463 protein_coding
ENSDARG00000095688 (BX005429.1)
 ENSDART00000124190 (BX005429.1-201) 15767932-15769678 pseudogene
CIL_0000D0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160752-ENSG00000160753 CGP 9606 1:155308748-155331114
GeneTranscriptPositionBiotype
ENSG00000160752 (FDPS)
farnesyl diphosphate synthase 		ENST00000356657 (FDPS-001) 155308916-155320665 protein_coding
ENST00000368356 (FDPS-002) 155308852-155320665 protein_coding
ENST00000447866 (FDPS-021) 155308794-155320609 protein_coding
ENST00000461507 (FDPS-012) 155308803-155318663 retained_intron
ENST00000465559 (FDPS-007) 155308959-155317982 protein_coding
ENST00000467076 (FDPS-020) 155308889-155320647 protein_coding
ENST00000468479 (FDPS-003) 155308755-155319688 processed_transcript
ENST00000470171 (FDPS-008) 155308968-155318814 processed_transcript
ENST00000471117 (FDPS-013) 155308863-155318473 retained_intron
ENST00000474345 (FDPS-010) 155308854-155318287 nonsense_mediated_decay
ENST00000477057 (FDPS-009) 155308985-155318928 processed_transcript
ENST00000487002 (FDPS-005) 155308914-155312979 retained_intron
ENST00000489003 (FDPS-011) 155308984-155318687 retained_intron
ENST00000489324 (FDPS-018) 155319655-155320609 retained_intron
ENST00000490140 (FDPS-017) 155318719-155320665 retained_intron
ENST00000491013 (FDPS-004) 155308914-155318905 protein_coding
ENST00000492244 (FDPS-015) 155318188-155320665 processed_transcript
ENST00000492887 (FDPS-016) 155318175-155319885 retained_intron
ENST00000495308 (FDPS-014) 155308893-155318518 retained_intron
ENST00000611010 (FDPS-201) 155308748-155320666 protein_coding
ENST00000612683 (FDPS-019) 155308970-155320637 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D0_0001ENSDARG00000040890ENSDART00000059928ENSDART00000122272ENSDART00000130353ENSDART00000142815ENSDART00000156064ENSDARG00000078125ENSDART00000114322ENSDART00000132075ENSDART00000135844ENSDART00000146165ENSDARG00000094759ENSDART00000139130ENSDARG00000095688ENSDART00000124190CIL_0000D0_0002ENSG00000160752ENST00000356657ENST00000368356ENST00000447866ENST00000461507ENST00000465559ENST00000467076ENST00000468479ENST00000470171ENST00000471117ENST00000474345ENST00000477057ENST00000487002ENST00000489003ENST00000489324ENST00000490140ENST00000491013ENST00000492244ENST00000492887ENST00000495308ENST00000611010ENST00000612683
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000D0_0001ENSDARG00000040890ENSDART00000059928ENSDART00000122272ENSDART00000130353ENSDART00000156064ENSDARG00000078125ENSDART00000114322ENSDART00000135844ENSDART00000146165ENSDARG00000094759ENSDART00000139130ENSDARG00000095688ENSDART00000124190CIL_0000D0_0002ENSG00000160752ENST00000356657ENST00000368356ENST00000447866ENST00000467076ENST00000468479ENST00000477057ENST00000490140ENST00000492244
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040890 ENSDART00000059928 N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A 4.515±0.00 N/A N/A N/A
ENSDART00000122272 N/A N/A N/A 6.218±2.61 N/A N/A 3.976±0.75 4.757±0.00 0.191±0.00 N/A 4.775±0.00 N/A N/A N/A
ENSDART00000130353 N/A N/A N/A N/A N/A N/A 3.108±0.21 N/A 0.112±0.00 N/A N/A N/A N/A N/A
ENSDART00000142815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156064 N/A N/A N/A 5.164±1.34 N/A N/A 17.062±14.06 19.495±10.49 N/A N/A 8.967±0.00 N/A N/A N/A
ENSDARG00000078125 ENSDART00000114322 N/A N/A N/A 6.655±1.80 N/A N/A 0.108±0.08 N/A 0.016±0.00 N/A N/A N/A N/A N/A
ENSDART00000132075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135844 N/A N/A N/A N/A N/A N/A 0.226±0.00 N/A 0.029±0.00 N/A N/A N/A N/A N/A
ENSDART00000146165 N/A N/A N/A N/A N/A N/A 0.182±0.00 N/A 0.019±0.00 N/A N/A N/A N/A N/A
ENSDARG00000094759 ENSDART00000139130 N/A N/A N/A N/A N/A N/A 6.400±1.98 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000095688 ENSDART00000124190 N/A N/A N/A N/A N/A N/A 1.599±0.44 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160752 ENST00000356657 N/A N/A N/A N/A 3.659±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000368356 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.835±0.00 N/A N/A N/A N/A
ENST00000447866 N/A N/A N/A 11.914±0.00 5.582±0.00 7.986±0.00 5.603±4.42 N/A 1.293±0.00 4.027±0.00 1.772±0.00 27.455±20.17 26.161±11.82 16.809±0.00
ENST00000461507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467076 20.226±0.00 38.393±0.00 5.968±0.00 23.223±0.00 25.850±0.00 11.491±4.99 1.692±0.00 30.023±0.29 22.082±20.56 26.844±21.30 5.908±1.68 44.289±35.42 49.871±12.37 N/A
ENST00000468479 26.729±0.00 48.955±0.00 N/A 28.072±0.00 26.899±0.00 18.802±0.00 7.213±4.49 49.260±0.00 N/A N/A 4.565±0.00 64.493±23.94 72.383±0.00 42.611±7.08
ENST00000470171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 75.749±0.00 34.024±0.00 N/A
ENST00000487002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.924±0.00 N/A N/A N/A
ENST00000491013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492244 N/A N/A N/A N/A N/A N/A N/A N/A 3.136±0.00 N/A N/A 11.296±0.00 N/A N/A
ENST00000492887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading