C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000DG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167264-ENSG00000167264 CGP 9606 16:67987746-68079320
GeneTranscriptPositionBiotype
ENSG00000182810 (DDX28)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 		ENST00000332395 (DDX28-001) 68021274-68023442 protein_coding
ENSG00000202336 (RNU6-359P)
RNA, U6 small nuclear 359, pseudogene 		ENST00000365466 (RNU6-359P-201) 68017710-68017817 snRNA
ENSG00000221789 (AC130462.1)
 ENST00000408862 (AC130462.1-201) 68055779-68055884 miRNA
ENSG00000262962 (KARSP3)
lysyl-tRNA synthetase pseudogene 3 		ENST00000571212 (KARSP3-001) 68002432-68004952 unprocessed_pseudogene
ENSG00000263201 (CTC-479C5.6)
 ENST00000574912 (CTC-479C5.6-001) 68013436-68015911 antisense
CIL_0000DG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031901-ENSMUSG00000031901 CGP 10090 8:105991337-106053840
GeneTranscriptPositionBiotype
ENSMUSG00000031901 (Dus2)
dihydrouridine synthase 2 		ENSMUST00000034375 (Dus2-001) 106011507-106053819 protein_coding
ENSMUST00000119736 (Dus2-002) 106011507-106053840 nonsense_mediated_decay
ENSMUST00000138524 (Dus2-003) 106033390-106045992 retained_intron
ENSMUST00000141374 (Dus2-005) 106011522-106030883 retained_intron
ENSMUST00000142898 (Dus2-006) 105991337-106015842 protein_coding
ENSMUST00000144904 (Dus2-004) 106048708-106052199 retained_intron
ENSMUSG00000045538 (Ddx28)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 		ENSMUST00000058579 (Ddx28-001) 106009621-106011882 protein_coding
ENSMUSG00000053687 (Dpep2)
dipeptidase 2 		ENSMUST00000034373 (Dpep2-002) 105984950-105991759 protein_coding
ENSMUST00000081998 (Dpep2-001) 105984945-105996423 protein_coding
ENSMUST00000117555 (Dpep2-003) 105984944-105991749 protein_coding
ENSMUST00000149057 (Dpep2-004) 105988499-105991750 retained_intron
ENSMUST00000150001 (Dpep2-005) 105987747-105991722 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DG_0001ENSG00000182810ENST00000332395ENSG00000202336ENST00000365466ENSG00000221789ENST00000408862ENSG00000262962ENST00000571212ENSG00000263201ENST00000574912CIL_0000DG_0002ENSMUSG00000031901ENSMUST00000034375ENSMUST00000119736ENSMUST00000138524ENSMUST00000141374ENSMUST00000142898ENSMUST00000144904ENSMUSG00000045538ENSMUST00000058579ENSMUSG00000053687ENSMUST00000034373ENSMUST00000081998ENSMUST00000117555ENSMUST00000149057ENSMUST00000150001
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000DG_0001ENSG00000182810ENST00000332395ENSG00000202336ENST00000365466ENSG00000221789ENST00000408862ENSG00000262962ENST00000571212ENSG00000263201ENST00000574912CIL_0000DG_0002ENSMUSG00000031901ENSMUST00000034375ENSMUST00000119736ENSMUSG00000045538ENSMUST00000058579ENSMUSG00000053687ENSMUST00000034373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182810 ENST00000332395 N/A N/A N/A 7.527±0.00 N/A N/A 6.101±0.00 N/A N/A N/A N/A 7.535±0.00 13.180±3.28 N/A
ENSG00000202336 ENST00000365466 N/A 0.779±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221789 ENST00000408862 N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262962 ENST00000571212 0.008±0.00 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A 0.026±0.00 0.035±0.00
ENSG00000263201 ENST00000574912 N/A 0.093±0.00 N/A 0.018±0.00 N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A 0.718±0.44 0.988±0.44
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031901 ENSMUST00000034375 6.647±0.34 3.829±0.29 6.606±1.06 5.969±2.17 6.157±1.11 3.138±0.67 3.562±0.32 4.961±0.29 4.152±1.44 3.887±0.32 3.991±0.75 6.923±1.77 3.600±1.10 6.126±0.62
ENSMUST00000119736 N/A N/A N/A N/A N/A N/A N/A N/A 1.631±0.00 N/A 1.129±0.00 4.428±0.82 N/A N/A
ENSMUST00000138524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045538 ENSMUST00000058579 6.097±0.36 7.965±1.08 6.669±0.97 6.411±0.77 9.067±2.66 4.380±0.57 2.876±0.37 4.112±0.38 5.993±1.37 4.344±0.47 4.274±0.33 8.499±1.02 4.608±0.51 2.736±0.37
ENSMUSG00000053687 ENSMUST00000034373 3.207±0.04 N/A N/A N/A 5.417±1.26 1.297±0.13 N/A N/A N/A 8.914±1.59 N/A 2.255±0.00 N/A N/A
ENSMUST00000081998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000117555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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