C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dihydrouridine synthase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034375 Dus2-001 ENSMUSG00000031901 10090 + 8:106011507-106053819 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034375
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034375 6.647±0.34 3.829±0.29 6.606±1.06 5.969±2.17 6.157±1.11 3.138±0.67 3.562±0.32 4.961±0.29 4.152±1.44 3.887±0.32 3.991±0.75 6.923±1.77 3.600±1.10 6.126±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PO CIL_0004PO_0002 CGP 8:105973520-105996423
CIL_0004RT CIL_0004RT_0002 CGP 8:105984944-106053840
CIL_0000DG CIL_0000DG_0002 CGP 8:105991337-106053840

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002943 IEA tRNA dihydrouridine synthesis
GO:0003725 ISS double-stranded RNA binding
GO:0004860 ISS protein kinase inhibitor activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0006469 IEA negative regulation of protein kinase activity
GO:0017150 IEA tRNA dihydrouridine synthase activity
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process
GO:0060548 ISS negative regulation of cell death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358896 DUS2-003 protein_coding Homo_sapiens 0 1812
ENST00000432752 DUS2-002 protein_coding Homo_sapiens 0 1291
ENST00000561965 DUS2-004 nonsense_mediated_decay Homo_sapiens 0 1583
ENST00000562246 DUS2-008 protein_coding Homo_sapiens 0 837
ENST00000564781 DUS2-007 protein_coding Homo_sapiens 0 196
ENST00000564975 DUS2-009 retained_intron Homo_sapiens 0 333
ENST00000565263 DUS2-001 protein_coding Homo_sapiens 0 1792
ENST00000565980 DUS2-010 retained_intron Homo_sapiens 0 222
ENST00000566306 DUS2-011 protein_coding Homo_sapiens 0 477
ENST00000567100 DUS2-005 protein_coding Homo_sapiens 0 300
ENST00000568099 DUS2-012 protein_coding Homo_sapiens 0 435
ENST00000569289 DUS2-006 protein_coding Homo_sapiens 6e-36 154
ENST00000570709 DUS2-014 protein_coding Homo_sapiens 0 503
ENST00000571081 DUS2-013 protein_coding Homo_sapiens 0 331
ENST00000575677 DUS2-015 protein_coding Homo_sapiens 0 656
ENST00000576994 DUS2-016 protein_coding Homo_sapiens 0 274

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