C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein H2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113202 Hnrnph2-005 ENSMUSG00000045427 10090 + X:134601258-134606758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000113202
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000113202 3.863±1.17 2.838±0.61 4.326±0.65 5.392±3.35 2.698±0.40 1.708±0.19 1.811±0.17 1.635±0.24 2.666±1.74 4.821±0.49 4.004±1.16 1.697±0.92 0.747±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000E9 CIL_0000E9_0002 CGP X:134588149-134607060
CIL_0000E3 CIL_0000E3_0002 CGP X:134601179-134696757

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0030529 ISO ribonucleoprotein complex
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000059918 hnrnph1-201 protein_coding Danio_rerio 0 379
ENSDART00000015636 hnrnph1l-001 protein_coding Danio_rerio 0 364
ENST00000316594 HNRNPH2-001 protein_coding Homo_sapiens 0 2540
ENST00000329433 HNRNPH1-009 protein_coding Homo_sapiens 0 1378
ENST00000337970 HNRNPF-004 protein_coding Homo_sapiens 0 575
ENST00000356053 HNRNPF-005 protein_coding Homo_sapiens 0 575
ENST00000356731 HNRNPH1-001 protein_coding Homo_sapiens 0 1535
ENST00000357065 HNRNPF-001 protein_coding Homo_sapiens 0 575
ENST00000393432 HNRNPH1-006 protein_coding Homo_sapiens 0 1535
ENST00000396845 HNRNPH1P2-001 processed_pseudogene Homo_sapiens 0 335
ENST00000403291 HNRNPH1P1-001 processed_pseudogene Homo_sapiens 0 1269
ENST00000409170 RPL36A-HNRNPH2-002 protein_coding Homo_sapiens 0 348
ENST00000409338 RPL36A-HNRNPH2-001 protein_coding Homo_sapiens 0 544
ENST00000442819 HNRNPH1-005 protein_coding Homo_sapiens 0 1535
ENST00000443950 HNRNPF-201 protein_coding Homo_sapiens 0 575
ENST00000503105 HNRNPH1-028 protein_coding Homo_sapiens 0 436
ENST00000504348 HNRNPH1-021 protein_coding Homo_sapiens 0 558
ENST00000504779 HNRNPH1-025 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000505087 HNRNPH1-018 retained_intron Homo_sapiens 0 252
ENST00000505811 HNRNPH1-015 protein_coding Homo_sapiens 0 680
ENST00000506721 HNRNPH1-022 protein_coding Homo_sapiens 0 436
ENST00000508103 HNRNPH1-027 protein_coding Homo_sapiens 0 436
ENST00000510411 HNRNPH1-008 protein_coding Homo_sapiens 0 1195
ENST00000510431 HNRNPH1-026 protein_coding Homo_sapiens 0 436
ENST00000510678 HNRNPH1-007 nonsense_mediated_decay Homo_sapiens 0 436
ENST00000512273 HNRNPH1-017 nonsense_mediated_decay Homo_sapiens 1e-38 163
ENST00000513225 HNRNPH1-013 protein_coding Homo_sapiens 0 542
ENST00000513972 HNRNPH1-019 retained_intron Homo_sapiens 0 436
ENST00000514332 HNRNPH1-003 retained_intron Homo_sapiens 0 1288
ENST00000514731 HNRNPH1-002 retained_intron Homo_sapiens 0 436
ENST00000515158 HNRNPH1-020 protein_coding Homo_sapiens 0 431
ENST00000515481 HNRNPH1-010 retained_intron Homo_sapiens 1.99993e-41 176
ENST00000515565 HNRNPH1P3-001 processed_pseudogene Homo_sapiens 0 867
ENST00000515714 HNRNPH1-016 protein_coding Homo_sapiens 0 252
ENST00000518548 HNRNPH1-039 processed_transcript Homo_sapiens 0 370
ENST00000519056 HNRNPH1-045 protein_coding Homo_sapiens 0 420
ENST00000519455 HNRNPH1-044 processed_transcript Homo_sapiens 0 191
ENST00000519707 HNRNPH1-047 retained_intron Homo_sapiens 0 436
ENST00000519943 HNRNPH1-038 retained_intron Homo_sapiens 0 370
ENST00000519958 HNRNPH1-050 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000520415 HNRNPH1-036 retained_intron Homo_sapiens 0 344
ENST00000521116 HNRNPH1-041 protein_coding Homo_sapiens 0 364
ENST00000521173 HNRNPH1-049 protein_coding Homo_sapiens 0 809
ENST00000521790 HNRNPH1-040 protein_coding Homo_sapiens 0 534
ENST00000522958 HNRNPH1-037 retained_intron Homo_sapiens 0 521
ENST00000523137 HNRNPH1-046 protein_coding Homo_sapiens 0 252
ENST00000524180 HNRNPH1-048 processed_transcript Homo_sapiens 0 436
ENST00000544000 HNRNPF-202 protein_coding Homo_sapiens 0 575

Loading