C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerol-3-phosphate dehydrogenase 1 (soluble)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162194 Gpd1-002 ENSMUSG00000023019 10090 + 15:99717579-99723792 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonPlacentaENSMUST00000162194
Transcript ID Colon Placenta
ENSMUST00000162194 7.155±1.58 0.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0002 VISTA 15:99507076-100109694
CIL_0008CC CIL_0008CC_0002 VISTA 15:99507743-100109214
CIL_0000F4 CIL_0000F4_0002 CGP 15:99702287-99725005
CIL_0000FK CIL_0000FK_0002 CGP 15:99717515-99728136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004367 IDA glycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0005739 IDA mitochondrion
GO:0006072 IMP glycerol-3-phosphate metabolic process
GO:0006094 IMP gluconeogenesis
GO:0006127 IMP glycerophosphate shuttle
GO:0009331 TAS glycerol-3-phosphate dehydrogenase complex
GO:0042803 IEA protein homodimerization activity
GO:0045821 IMP positive regulation of glycolytic process
GO:0046168 IEA glycerol-3-phosphate catabolic process
GO:0051287 IEA NAD binding
GO:0071320 IDA cellular response to cAMP
GO:0071356 IDA cellular response to tumor necrosis factor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301149 GPD1-001 protein_coding Homo_sapiens 0 1037
ENST00000547190 GPD1-007 processed_transcript Homo_sapiens 0 446
ENST00000547964 GPD1-003 nonsense_mediated_decay Homo_sapiens 0 243
ENST00000548152 GPD1-004 processed_transcript Homo_sapiens 2e-17 94
ENST00000548814 GPD1-002 protein_coding Homo_sapiens 0 1343
ENST00000550172 GPD1-005 retained_intron Homo_sapiens 0 444
ENST00000551939 GPD1-006 retained_intron Homo_sapiens 3e-17 94

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