C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427639 RPL7P2-001 ENSG00000227663 9606 + 20:2075555-2075822 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastMuscleENST00000427639
Transcript ID Adipose Adrenal Breast Muscle
ENST00000427639 0.107±0.00 0.055±0.00 0.054±0.00 0.047±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FS CIL_0000FS_0001 CGP 20:1978757-2177038

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 294
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 283
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 283
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000122189 Gm5392-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 243
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 243
ENSMUST00000118692 Gm12090-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000149566 Rpl7-003 protein_coding Mus_musculus 0 209
ENSMUST00000117062 Gm15159-001 processed_pseudogene Mus_musculus 0 198

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