C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroid adenoma associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047524 Thada-201 ENSMUSG00000024251 10090 - 17:84190056-84466196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047524
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047524 2.610±1.26 2.708±0.73 1.982±0.25 1.939±0.82 2.080±0.92 0.755±0.29 1.019±0.11 1.520±0.45 1.102±0.55 2.300±0.83 0.796±0.15 2.868±1.27 1.352±0.44 3.510±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SZ CIL_0008SZ_0002 VISTA 17:83879514-84482025
CIL_0001XK CIL_0001XK_0002 CGP 17:84183931-84466196
CIL_0000GQ CIL_0000GQ_0002 CGP 17:84190056-84622142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398653 THADA-003 nonsense_mediated_decay Homo_sapiens 0 1934
ENST00000402360 THADA-007 protein_coding Homo_sapiens 0 1474
ENST00000402796 THADA-010 nonsense_mediated_decay Homo_sapiens 0 1334
ENST00000403856 THADA-005 protein_coding Homo_sapiens 0 1474
ENST00000404790 THADA-004 protein_coding Homo_sapiens 0 1474
ENST00000405006 THADA-002 protein_coding Homo_sapiens 0 3526
ENST00000405975 THADA-001 protein_coding Homo_sapiens 0 3526
ENST00000407351 THADA-009 protein_coding Homo_sapiens 0 1725
ENST00000408045 THADA-021 nonsense_mediated_decay Homo_sapiens 0 2555
ENST00000462185 THADA-011 processed_transcript Homo_sapiens 0 370
ENST00000467668 THADA-017 processed_transcript Homo_sapiens 0 244
ENST00000469323 THADA-012 processed_transcript Homo_sapiens 0 353
ENST00000473004 THADA-014 processed_transcript Homo_sapiens 1e-24 117
ENST00000474159 THADA-006 nonsense_mediated_decay Homo_sapiens 0 917
ENST00000485353 THADA-013 processed_transcript Homo_sapiens 0 449
ENST00000486735 THADA-020 processed_transcript Homo_sapiens 0 351
ENST00000497770 THADA-015 processed_transcript Homo_sapiens 2e-25 119

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