C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000GU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020079-ENSDARG00000004889 CGP 7955 14:37635215-37657608
GeneTranscriptPositionBiotype
ENSDARG00000004889 (aga)
aspartylglucosaminidase 		ENSDART00000016728 (aga-201) 37648802-37657608 protein_coding
ENSDARG00000020079 (neil3)
nei endonuclease VIII-like 3 (E. coli) 		ENSDART00000015761 (neil3-201) 37635257-37648786 protein_coding
ENSDART00000123343 (neil3-001) 37635215-37648796 protein_coding
ENSDART00000142930 (neil3-002) 37635215-37640102 retained_intron
CIL_0000GU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109674-ENSG00000038002 CGP 9606 4:177309836-177442503
GeneTranscriptPositionBiotype
ENSG00000038002 (AGA)
aspartylglucosaminidase 		ENST00000264595 (AGA-001) 177430770-177442503 protein_coding
ENST00000502310 (AGA-006) 177433261-177439624 protein_coding
ENST00000506853 (AGA-003) 177434384-177442409 processed_transcript
ENST00000510635 (AGA-004) 177434440-177439665 protein_coding
ENST00000510955 (AGA-002) 177437068-177442409 retained_intron
ENST00000511231 (AGA-005) 177440042-177442409 retained_intron
ENSG00000109674 (NEIL3)
nei endonuclease VIII-like 3 (E. coli) 		ENST00000264596 (NEIL3-001) 177309836-177362943 protein_coding
ENST00000513321 (NEIL3-002) 177309903-177354279 nonsense_mediated_decay
ENSG00000249084 (RP11-376O6.2)
 ENST00000506895 (RP11-376O6.2-001) 177343004-177357032 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GU_0001ENSDARG00000004889ENSDART00000016728ENSDARG00000020079ENSDART00000015761ENSDART00000123343ENSDART00000142930CIL_0000GU_0002ENSG00000038002ENST00000264595ENST00000502310ENST00000506853ENST00000510635ENST00000510955ENST00000511231ENSG00000109674ENST00000264596ENST00000513321ENSG00000249084ENST00000506895
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GU_0001ENSDARG00000004889ENSDART00000016728ENSDARG00000020079ENSDART00000015761ENSDART00000123343ENSDART00000142930CIL_0000GU_0002ENSG00000038002ENST00000264595ENST00000502310ENST00000506853ENSG00000109674ENST00000264596ENST00000513321ENSG00000249084ENST00000506895
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004889 ENSDART00000016728 N/A N/A N/A 4.948±5.51 N/A N/A 6.014±2.31 13.452±5.00 1.375±0.00 N/A 1.344±0.00 N/A N/A N/A
ENSDARG00000020079 ENSDART00000015761 N/A N/A N/A 0.503±0.25 N/A N/A 1.159±0.00 11.126±0.00 0.287±0.00 N/A 0.967±0.00 N/A N/A N/A
ENSDART00000123343 N/A N/A N/A N/A N/A N/A N/A 0.256±0.05 N/A N/A N/A N/A N/A N/A
ENSDART00000142930 N/A N/A N/A 0.446±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000038002 ENST00000264595 1.269±0.00 4.121±0.00 1.228±0.00 2.365±0.46 3.263±1.98 1.439±0.47 1.118±0.77 3.424±0.96 2.897±2.11 2.545±0.97 N/A 2.395±1.35 4.369±0.61 5.200±0.96
ENST00000502310 2.324±0.00 7.270±0.00 2.631±0.00 N/A N/A 4.130±0.00 0.488±0.00 N/A 6.402±0.00 N/A 1.149±0.11 5.749±0.00 23.446±0.00 23.307±0.00
ENST00000506853 2.273±0.00 N/A 1.960±0.00 2.515±0.00 1.851±0.00 2.675±0.37 N/A 2.821±0.00 2.886±1.78 2.535±0.00 0.802±0.49 2.471±0.68 10.286±10.52 15.325±9.86
ENST00000510635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000109674 ENST00000264596 N/A N/A N/A N/A 0.195±0.19 0.298±0.27 0.013±0.00 0.019±0.00 0.075±0.00 N/A N/A 0.078±0.04 0.245±0.09 1.007±0.24
ENST00000513321 N/A 0.202±0.00 N/A 0.073±0.03 0.064±0.00 0.073±0.00 0.052±0.03 0.061±0.00 0.046±0.00 0.223±0.00 N/A 0.080±0.06 N/A N/A
ENSG00000249084 ENST00000506895 0.219±0.00 N/A N/A N/A N/A 1.003±0.00 N/A N/A 0.097±0.00 0.061±0.00 N/A 0.047±0.00 N/A 1.306±0.69

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