C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000GX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040465-ENSDARG00000055045 CGP 7955 14:4263300-4324092
GeneTranscriptPositionBiotype
ENSDARG00000040465 (IRF2 (2 of 2))
interferon regulatory factor 2 		ENSDART00000059230 (IRF2 (2 of 2)-201) 4263300-4291785 protein_coding
ENSDARG00000055045 (casp3b)
caspase 3, apoptosis-related cysteine protease b 		ENSDART00000077348 (casp3b-201) 4304679-4321603 protein_coding
ENSDART00000149874 (casp3b-001) 4307861-4324092 protein_coding
CIL_0000GX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168310-ENSG00000164305 CGP 9606 4:184387713-184649509
GeneTranscriptPositionBiotype
ENSG00000164305 (CASP3)
caspase 3, apoptosis-related cysteine peptidase 		ENST00000308394 (CASP3-001) 184627696-184649475 protein_coding
ENST00000393585 (CASP3-002) 184627696-184648592 protein_coding
ENST00000393588 (CASP3-005) 184629384-184649455 protein_coding
ENST00000447121 (CASP3-004) 184631896-184649447 protein_coding
ENST00000517513 (CASP3-006) 184629256-184649447 protein_coding
ENST00000523916 (CASP3-003) 184627696-184649509 protein_coding
ENST00000613118 (CASP3-201) 184627697-184648592 protein_coding
ENSG00000168310 (IRF2)
interferon regulatory factor 2 		ENST00000393593 (IRF2-001) 184387713-184474580 protein_coding
ENST00000502750 (IRF2-010) 184389040-184418631 protein_coding
ENST00000504340 (IRF2-003) 184448656-184474548 processed_transcript
ENST00000505067 (IRF2-009) 184389022-184418590 protein_coding
ENST00000506230 (IRF2-004) 184418167-184474186 protein_coding
ENST00000507523 (IRF2-005) 184408158-184474049 protein_coding
ENST00000509274 (IRF2-006) 184418175-184474047 nonsense_mediated_decay
ENST00000510814 (IRF2-007) 184408205-184474048 protein_coding
ENST00000512020 (IRF2-008) 184408159-184474548 processed_transcript
ENSG00000249056 (RP11-326I11.1)
 ENST00000513481 (RP11-326I11.1-001) 184559175-184559783 processed_pseudogene
ENSG00000254233 (RP11-242J7.1)
 ENST00000519173 (RP11-242J7.1-002) 184619046-184624942 lincRNA
ENST00000520280 (RP11-242J7.1-003) 184618889-184624879 lincRNA
ENST00000522554 (RP11-242J7.1-001) 184584093-184625030 lincRNA
ENSG00000270426 (RP11-326I11.5)
 ENST00000605082 (RP11-326I11.5-001) 184471924-184472609 sense_intronic
ENSG00000271538 (RP11-326I11.4)
 ENST00000604660 (RP11-326I11.4-002) 184506918-184509688 lincRNA
ENST00000605270 (RP11-326I11.4-001) 184506460-184537554 lincRNA
ENSG00000271646 (RP11-326I11.3)
 ENST00000605834 (RP11-326I11.3-001) 184474802-184477304 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GX_0001ENSDARG00000040465ENSDART00000059230ENSDARG00000055045ENSDART00000077348ENSDART00000149874CIL_0000GX_0002ENSG00000164305ENST00000308394ENST00000393585ENST00000393588ENST00000447121ENST00000517513ENST00000523916ENST00000613118ENSG00000168310ENST00000393593ENST00000502750ENST00000504340ENST00000505067ENST00000506230ENST00000507523ENST00000509274ENST00000510814ENST00000512020ENSG00000249056ENST00000513481ENSG00000254233ENST00000519173ENST00000520280ENST00000522554ENSG00000270426ENST00000605082ENSG00000271538ENST00000604660ENST00000605270ENSG00000271646ENST00000605834
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GX_0001ENSDARG00000040465ENSDART00000059230ENSDARG00000055045ENSDART00000077348ENSDART00000149874CIL_0000GX_0002ENSG00000164305ENST00000308394ENST00000523916ENST00000613118ENSG00000168310ENST00000393593ENST00000504340ENST00000512020ENSG00000249056ENST00000513481ENSG00000254233ENST00000519173ENST00000520280ENST00000522554ENSG00000270426ENST00000605082ENSG00000271538ENST00000604660ENST00000605270ENSG00000271646ENST00000605834
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040465 ENSDART00000059230 N/A N/A N/A 1.100±0.00 N/A N/A 0.996±0.00 N/A 2.067±0.00 N/A N/A N/A N/A N/A
ENSDARG00000055045 ENSDART00000077348 N/A N/A N/A 0.011±0.00 N/A N/A 0.276±0.01 0.103±0.01 N/A N/A 0.052±0.00 N/A N/A N/A
ENSDART00000149874 N/A N/A N/A 0.337±0.15 N/A N/A 2.665±0.94 2.157±0.97 0.110±0.00 N/A 0.221±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164305 ENST00000308394 2.571±0.00 1.619±0.00 N/A 1.200±0.00 2.291±0.00 N/A 1.036±0.00 1.457±0.75 0.712±0.33 N/A N/A 2.974±0.49 3.908±0.77 1.512±0.21
ENST00000393585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523916 2.201±0.00 4.389±0.00 0.729±0.00 4.014±0.00 1.903±0.91 2.527±0.78 1.717±0.00 1.423±1.13 2.055±0.36 1.250±0.64 1.873±0.00 11.483±11.84 5.846±5.66 4.782±0.09
ENST00000613118 N/A N/A N/A N/A 0.647±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168310 ENST00000393593 13.802±0.00 9.781±0.00 5.801±0.00 5.712±0.84 7.900±0.09 10.979±3.96 3.406±0.37 7.866±4.59 6.644±2.30 15.021±4.89 9.820±0.00 8.960±2.01 10.119±2.28 5.524±3.89
ENST00000502750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504340 N/A N/A N/A N/A N/A 5.710±0.00 N/A 8.996±0.00 N/A N/A N/A N/A N/A N/A
ENST00000505067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512020 N/A N/A 5.120±0.00 N/A N/A 3.385±0.00 2.967±0.00 N/A 6.878±0.00 13.264±0.00 8.505±0.00 7.249±0.00 N/A N/A
ENSG00000249056 ENST00000513481 N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 0.032±0.00 N/A N/A
ENSG00000254233 ENST00000519173 N/A N/A N/A N/A N/A N/A N/A 0.235±0.00 N/A N/A N/A N/A 0.792±0.00 N/A
ENST00000520280 N/A 0.040±0.00 N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A 0.194±0.00 0.487±0.00 N/A N/A
ENST00000522554 N/A 0.129±0.00 N/A 0.058±0.00 N/A N/A N/A N/A N/A 0.505±0.00 N/A 0.234±0.00 N/A 0.050±0.00
ENSG00000270426 ENST00000605082 0.056±0.00 0.407±0.00 0.097±0.00 0.872±0.18 0.180±0.00 1.858±1.74 0.360±0.05 0.564±0.34 0.198±0.10 1.428±1.41 0.736±0.59 0.654±0.40 0.163±0.05 0.228±0.02
ENSG00000271538 ENST00000604660 N/A N/A 0.332±0.00 0.519±0.00 N/A N/A 0.095±0.06 N/A 0.456±0.00 N/A N/A N/A N/A 0.058±0.00
ENST00000605270 N/A 0.286±0.00 0.296±0.00 1.789±0.00 0.035±0.01 N/A N/A 0.068±0.00 N/A 0.111±0.00 N/A 0.112±0.02 0.098±0.01 0.138±0.00
ENSG00000271646 ENST00000605834 0.804±0.00 2.934±0.00 N/A 0.531±0.44 0.553±0.35 0.412±0.23 0.148±0.13 0.690±0.28 0.373±0.13 0.407±0.16 0.437±0.00 0.607±0.37 0.879±0.30 0.427±0.04

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