C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043857-ENSDARG00000076856 CGP 7955 10:26582376-26746559
GeneTranscriptPositionBiotype
ENSDARG00000043857 (ufm1)
ubiquitin-fold modifier 1 		ENSDART00000064393 (ufm1-001) 26582376-26596488 protein_coding
ENSDART00000138516 (ufm1-002) 26582672-26595178 processed_transcript
ENSDARG00000076856 (frem2a)
Fras1 related extracellular matrix protein 2a 		ENSDART00000108808 (frem2a-001) 26616760-26746559 protein_coding
ENSDART00000128292 (frem2a-201) 26616760-26746417 protein_coding
CIL_0000HL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120686-ENSG00000150893 CGP 9606 13:38349849-38887131
GeneTranscriptPositionBiotype
ENSG00000120686 (UFM1)
ubiquitin-fold modifier 1 		ENST00000239878 (UFM1-001) 38349881-38363619 protein_coding
ENST00000379649 (UFM1-003) 38349851-38361125 protein_coding
ENST00000437952 (UFM1-005) 38349996-38359781 protein_coding
ENST00000464423 (UFM1-004) 38349886-38354558 retained_intron
ENST00000494372 (UFM1-002) 38349849-38354885 retained_intron
ENSG00000150893 (FREM2)
FRAS1 related extracellular matrix protein 2 		ENST00000280481 (FREM2-001) 38687129-38887131 protein_coding
ENST00000482551 (FREM2-002) 38821696-38850235 processed_transcript
ENSG00000229437 (LINC00366)
long intergenic non-protein coding RNA 366 		ENST00000441430 (LINC00366-001) 38576640-38578994 lincRNA
ENSG00000234701 (PRDX3P3)
peroxiredoxin 3 pseudogene 3 		ENST00000447765 (PRDX3P3-001) 38617419-38617940 processed_pseudogene
ENSG00000236354 (LINC00437)
long intergenic non-protein coding RNA 437 		ENST00000414161 (LINC00437-001) 38533343-38545299 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HL_0001ENSDARG00000043857ENSDART00000064393ENSDART00000138516ENSDARG00000076856ENSDART00000108808ENSDART00000128292CIL_0000HL_0002ENSG00000120686ENST00000239878ENST00000379649ENST00000437952ENST00000464423ENST00000494372ENSG00000150893ENST00000280481ENST00000482551ENSG00000229437ENST00000441430ENSG00000234701ENST00000447765ENSG00000236354ENST00000414161
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HL_0001ENSDARG00000043857ENSDART00000064393ENSDART00000138516ENSDARG00000076856ENSDART00000108808ENSDART00000128292CIL_0000HL_0002ENSG00000120686ENST00000239878ENST00000379649ENSG00000150893ENST00000280481ENST00000482551ENSG00000229437ENST00000441430ENSG00000234701ENST00000447765ENSG00000236354ENST00000414161
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043857 ENSDART00000064393 N/A N/A N/A 8.083±4.68 N/A N/A 5.903±2.03 7.231±0.00 0.715±0.00 N/A 3.307±0.00 N/A N/A N/A
ENSDART00000138516 N/A N/A N/A 14.845±4.11 N/A N/A 4.674±1.11 20.024±0.00 1.192±0.00 N/A 4.335±0.00 N/A N/A N/A
ENSDARG00000076856 ENSDART00000108808 N/A N/A N/A 1.120±0.83 N/A N/A 0.041±0.00 0.109±0.00 N/A N/A 0.020±0.00 N/A N/A N/A
ENSDART00000128292 N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120686 ENST00000239878 N/A N/A 1.129±0.00 8.724±0.00 5.652±0.00 5.615±0.00 3.229±0.00 8.639±0.00 4.899±0.00 4.656±0.00 0.679±0.00 10.575±6.74 5.899±6.55 6.044±0.00
ENST00000379649 N/A N/A N/A N/A N/A 7.693±0.00 N/A N/A N/A N/A 0.701±0.00 N/A N/A N/A
ENST00000437952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000150893 ENST00000280481 0.008±0.00 0.013±0.00 N/A 0.359±0.16 0.081±0.06 0.090±0.04 0.050±0.04 0.413±0.00 0.127±0.12 0.792±0.58 1.094±0.65 0.219±0.22 0.269±0.12 0.149±0.05
ENST00000482551 N/A N/A N/A N/A N/A N/A N/A 1.023±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000229437 ENST00000441430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.555±0.11
ENSG00000234701 ENST00000447765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.00
ENSG00000236354 ENST00000414161 N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A 0.070±0.00

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