C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FRAS1 related extracellular matrix protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000280481 FREM2-001 ENSG00000150893 9606 + 13:38687129-38887131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000280481
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000280481 0.008±0.00 0.013±0.00 0.359±0.16 0.081±0.06 0.090±0.04 0.050±0.04 0.413±0.00 0.127±0.12 0.792±0.58 1.094±0.65 0.219±0.22 0.269±0.12 0.149±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HL CIL_0000HL_0002 CGP 13:38349849-38887131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002009 IEA morphogenesis of an epithelium
GO:0005509 IEA calcium ion binding
GO:0005604 IEA basement membrane
GO:0005886 IEA plasma membrane
GO:0007154 IEA cell communication
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0048839 IEA inner ear development
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091137 Frem2-201 protein_coding Mus_musculus 0 8935
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.00002 58
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.00002 58

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