C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000IS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172987-ENSG00000119946 CGP 9606 10:98457077-99394330
GeneTranscriptPositionBiotype
ENSG00000119946 (CNNM1)
cyclin and CBS domain divalent metal cation transport mediator 1 		ENST00000356713 (CNNM1-001) 99329099-99394330 protein_coding
ENST00000488090 (CNNM1-002) 99368337-99377328 processed_transcript
ENSG00000172987 (HPSE2)
heparanase 2 (inactive) 		ENST00000370546 (HPSE2-002) 98459574-99235802 protein_coding
ENST00000370549 (HPSE2-003) 98459118-99235862 protein_coding
ENST00000370552 (HPSE2-001) 98459118-99235862 protein_coding
ENST00000404542 (HPSE2-201) 98457077-98744071 protein_coding
ENST00000614306 (HPSE2-202) 99232349-99235802 protein_coding
ENSG00000234109 (RPL7P36)
ribosomal protein L7 pseudogene 36 		ENST00000444633 (RPL7P36-001) 99047639-99048319 processed_pseudogene
ENSG00000236818 (ARL5AP2)
ADP-ribosylation factor-like 5A pseudogene 2 		ENST00000444698 (ARL5AP2-001) 99013103-99013952 processed_pseudogene
CIL_0000IS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074852-ENSMUSG00000025189 CGP 10090 19:42788947-43497212
GeneTranscriptPositionBiotype
ENSMUSG00000025189 (Cnnm1)
cyclin M1 		ENSMUST00000165311 (Cnnm1-201) 43440436-43497212 protein_coding
ENSMUSG00000047509 (Gm6776)
predicted pseudogene 6776 		ENSMUST00000057752 (Gm6776-201) 43280798-43281697 processed_pseudogene
ENSMUSG00000074852 (Hpse2)
heparanase 2 		ENSMUST00000099428 (Hpse2-201) 42788947-43388311 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IS_0001ENSG00000119946ENST00000356713ENST00000488090ENSG00000172987ENST00000370546ENST00000370549ENST00000370552ENST00000404542ENST00000614306ENSG00000234109ENST00000444633ENSG00000236818ENST00000444698CIL_0000IS_0002ENSMUSG00000025189ENSMUST00000165311ENSMUSG00000047509ENSMUST00000057752ENSMUSG00000074852ENSMUST00000099428
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IS_0001ENSG00000119946ENST00000356713ENSG00000172987ENST00000370546ENST00000370549ENST00000370552ENST00000404542ENSG00000234109ENST00000444633ENSG00000236818ENST00000444698CIL_0000IS_0002ENSMUSG00000025189ENSMUST00000165311ENSMUSG00000047509ENSMUST00000057752ENSMUSG00000074852ENSMUST00000099428
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119946 ENST00000356713 0.156±0.00 0.115±0.00 0.077±0.00 3.547±2.16 0.155±0.05 0.203±0.16 0.042±0.00 0.289±0.27 0.084±0.03 0.042±0.00 0.010±0.00 0.412±0.33 0.048±0.03 4.467±0.01
ENST00000488090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172987 ENST00000370546 N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A
ENST00000370549 N/A N/A 0.141±0.00 0.424±0.00 N/A N/A N/A N/A N/A N/A N/A 0.256±0.00 N/A N/A
ENST00000370552 N/A N/A N/A N/A N/A 0.300±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404542 0.350±0.00 0.031±0.00 0.063±0.00 0.895±0.00 0.796±0.00 0.738±0.49 0.013±0.01 0.177±0.07 1.380±0.00 0.404±0.15 N/A 0.102±0.07 0.605±0.22 0.254±0.00
ENST00000614306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234109 ENST00000444633 N/A N/A N/A 0.018±0.00 0.121±0.00 0.162±0.00 0.049±0.00 N/A 0.511±0.00 N/A N/A 0.089±0.02 N/A 0.054±0.00
ENSG00000236818 ENST00000444698 N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025189 ENSMUST00000165311 N/A 0.073±0.03 0.362±0.01 1.370±1.11 0.026±0.02 0.281±0.10 0.012±0.00 1.993±0.50 0.046±0.03 0.020±0.01 0.021±0.01 1.813±1.06 0.234±0.33 0.879±0.38
ENSMUSG00000047509 ENSMUST00000057752 0.054±0.00 N/A 0.164±0.00 0.010±0.00 0.150±0.00 0.183±0.00 N/A N/A N/A N/A 0.033±0.00 N/A 0.018±0.00 0.113±0.11
ENSMUSG00000074852 ENSMUST00000099428 0.082±0.04 N/A 2.337±0.39 0.042±0.00 0.128±0.06 0.322±0.18 0.076±0.01 0.093±0.05 0.015±0.01 0.512±0.21 N/A 0.105±0.07 0.034±0.02 N/A

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