C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6776
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057752 Gm6776-201 ENSMUSG00000047509 10090 + 19:43280798-43281697 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonMusclePlacentaTestisENSMUST00000057752
Transcript ID Adipose Bladder Brain Breast Colon Muscle Placenta Testis
ENSMUST00000057752 0.054±0.00 0.164±0.00 0.010±0.00 0.150±0.00 0.183±0.00 0.033±0.00 0.018±0.00 0.113±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054W CIL_00054W_0002 CGP 19:42755105-43388311
CIL_0000IS CIL_0000IS_0002 CGP 19:42788947-43497212

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296135 LZTFL1-001 protein_coding Homo_sapiens 0 987
ENST00000411866 LZTFL1-007 nonsense_mediated_decay Homo_sapiens 0 819
ENST00000418700 LZTFL1-002 nonsense_mediated_decay Homo_sapiens 0 981
ENST00000440576 LZTFL1-010 protein_coding Homo_sapiens 0 381
ENST00000445698 LZTFL1-008 protein_coding Homo_sapiens 0 361
ENST00000448111 LZTFL1-003 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000469874 LZTFL1-011 processed_transcript Homo_sapiens 0 324
ENST00000472635 LZTFL1-014 processed_transcript Homo_sapiens 1e-34 150
ENST00000478551 LZTFL1-009 retained_intron Homo_sapiens 0 263
ENST00000480156 LZTFL1-015 retained_intron Homo_sapiens 0 521
ENST00000490463 LZTFL1-005 processed_transcript Homo_sapiens 0 640
ENST00000492333 LZTFL1-013 processed_transcript Homo_sapiens 0 281
ENST00000495864 LZTFL1-004 retained_intron Homo_sapiens 0 372
ENST00000536047 LZTFL1-201 protein_coding Homo_sapiens 0 981
ENST00000539217 LZTFL1-202 protein_coding Homo_sapiens 0 651

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