C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444633 RPL7P36-001 ENSG00000234109 9606 + 10:99047639-99048319 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverOvaryTestisENST00000444633
Transcript ID Brain Breast Colon Heart Liver Ovary Testis
ENST00000444633 0.018±0.00 0.121±0.00 0.162±0.00 0.049±0.00 0.511±0.00 0.089±0.02 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054W CIL_00054W_0001 CGP 10:98416198-99235862
CIL_0000IS CIL_0000IS_0001 CGP 10:98457077-99394330

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 610
ENSMUST00000149566 Rpl7-003 protein_coding Mus_musculus 0 593
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 593
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000118692 Gm12090-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000122189 Gm5392-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 348
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 1e-39 167
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 1e-39 167

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