C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparanase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099428 Hpse2-201 ENSMUSG00000074852 10090 - 19:42788947-43388311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000099428
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000099428 0.082±0.04 2.337±0.39 0.042±0.00 0.128±0.06 0.322±0.18 0.076±0.01 0.093±0.05 0.015±0.01 0.512±0.21 0.105±0.07 0.034±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054W CIL_00054W_0002 CGP 19:42755105-43388311
CIL_0000IS CIL_0000IS_0002 CGP 19:42788947-43497212

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005975 IEA carbohydrate metabolic process
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016798 IEA hydrolase activity, acting on glycosyl bonds
GO:0043395 IEA heparan sulfate proteoglycan binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370546 HPSE2-002 protein_coding Homo_sapiens 0 2353
ENST00000370549 HPSE2-003 protein_coding Homo_sapiens 0 1391
ENST00000370552 HPSE2-001 protein_coding Homo_sapiens 0 2615
ENST00000404542 HPSE2-201 protein_coding Homo_sapiens 0 1705
ENST00000614306 HPSE2-202 protein_coding Homo_sapiens 0 693

Loading