C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000067676-ENSDARG00000061885 CGP 7955 9:33391822-33637722
GeneTranscriptPositionBiotype
ENSDARG00000061885 (satb2)
SATB homeobox 2 		ENSDART00000088876 (satb2-001) 33593707-33637722 protein_coding
ENSDARG00000067676 (plcl1)
phospholipase C-like 1 		ENSDART00000144608 (plcl1-001) 33391822-33490451 protein_coding
ENSDARG00000092179 (si:ch211-117m22.2)
si:ch211-117m22.2 		ENSDART00000138597 (si:ch211-117m22.2-001) 33388543-33391973 processed_transcript
CIL_0000JH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115896-ENSG00000119042 CGP 9606 2:197804702-199471266
GeneTranscriptPositionBiotype
ENSG00000115896 (PLCL1)
phospholipase C-like 1 		ENST00000428675 (PLCL1-006) 197804702-198148401 protein_coding
ENST00000435320 (PLCL1-001) 197804702-198149884 nonsense_mediated_decay
ENST00000437704 (PLCL1-201) 198083749-198149884 protein_coding
ENST00000472193 (PLCL1-005) 198346829-198572581 processed_transcript
ENST00000487695 (PLCL1-002) 197810258-198146932 protein_coding
ENST00000625084 (PLCL1-007) 198149375-198355486 processed_transcript
ENSG00000119042 (SATB2)
SATB homeobox 2 		ENST00000260926 (SATB2-003) 199269508-199465108 protein_coding
ENST00000417098 (SATB2-001) 199269500-199458096 protein_coding
ENST00000428695 (SATB2-007) 199271975-199456088 protein_coding
ENST00000440919 (SATB2-005) 199395831-199457612 nonsense_mediated_decay
ENST00000443023 (SATB2-010) 199269508-199458745 protein_coding
ENST00000457245 (SATB2-002) 199272150-199471266 protein_coding
ENST00000463386 (SATB2-004) 199456053-199465167 processed_transcript
ENST00000473517 (SATB2-009) 199308860-199329035 retained_intron
ENST00000483346 (SATB2-006) 199346866-199368943 retained_intron
ENST00000484124 (SATB2-008) 199368610-199423915 processed_transcript
ENST00000614512 (SATB2-201) 199269500-199465108 protein_coding
ENSG00000225421 (AC019330.1)
 ENST00000440609 (AC019330.1-001) 198553195-198772356 lincRNA
ENSG00000225953 (SATB2-AS1)
SATB2 antisense RNA 1 		ENST00000416200 (SATB2-AS1-002) 199469896-199476935 antisense
ENST00000441234 (SATB2-AS1-004) 199457837-199476504 antisense
ENST00000442967 (SATB2-AS1-006) 199457700-199459892 antisense
ENST00000446911 (SATB2-AS1-003) 199468886-199470153 antisense
ENST00000450728 (SATB2-AS1-001) 199468098-199472756 antisense
ENSG00000230407 (AC018717.2)
 ENST00000457712 (AC018717.2-001) 199108584-199110088 processed_pseudogene
ENSG00000231557 (AC018717.1)
 ENST00000456031 (AC018717.1-001) 198882573-199071791 lincRNA
ENSG00000236653 (AC005235.1)
 ENST00000443261 (AC005235.1-003) 198374476-198375097 lincRNA
ENST00000451266 (AC005235.1-002) 198301408-198314714 lincRNA
ENST00000456248 (AC005235.1-001) 198299363-198374549 lincRNA
ENSG00000252511 (AC019330.2)
 ENST00000516702 (AC019330.2-201) 198566645-198566729 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JH_0001ENSDARG00000061885ENSDART00000088876ENSDARG00000067676ENSDART00000144608ENSDARG00000092179ENSDART00000138597CIL_0000JH_0002ENSG00000115896ENST00000428675ENST00000435320ENST00000437704ENST00000472193ENST00000487695ENST00000625084ENSG00000119042ENST00000260926ENST00000417098ENST00000428695ENST00000440919ENST00000443023ENST00000457245ENST00000463386ENST00000473517ENST00000483346ENST00000484124ENST00000614512ENSG00000225421ENST00000440609ENSG00000225953ENST00000416200ENST00000441234ENST00000442967ENST00000446911ENST00000450728ENSG00000230407ENST00000457712ENSG00000231557ENST00000456031ENSG00000236653ENST00000443261ENST00000451266ENST00000456248ENSG00000252511ENST00000516702
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JH_0001ENSDARG00000061885ENSDART00000088876ENSDARG00000067676ENSDART00000144608ENSDARG00000092179ENSDART00000138597CIL_0000JH_0002ENSG00000115896ENST00000428675ENST00000435320ENST00000437704ENST00000487695ENSG00000119042ENST00000260926ENST00000417098ENST00000428695ENST00000440919ENST00000443023ENST00000457245ENST00000483346ENST00000484124ENST00000614512ENSG00000225421ENST00000440609ENSG00000225953ENST00000416200ENSG00000230407ENST00000457712ENSG00000231557ENST00000456031ENSG00000236653ENST00000443261ENST00000451266ENST00000456248ENSG00000252511ENST00000516702
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061885 ENSDART00000088876 N/A N/A N/A 0.135±0.03 N/A N/A 0.067±0.02 N/A 0.013±0.00 N/A 0.101±0.00 N/A N/A N/A
ENSDARG00000067676 ENSDART00000144608 N/A N/A N/A N/A N/A N/A 0.303±0.01 0.548±0.28 0.043±0.00 N/A 1.187±0.00 N/A N/A N/A
ENSDARG00000092179 ENSDART00000138597 N/A N/A N/A N/A N/A N/A 4.752±0.45 4.826±0.00 0.241±0.00 N/A 1.199±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115896 ENST00000428675 1.419±0.00 0.513±0.00 1.666±0.00 3.535±2.65 0.830±0.08 1.143±0.82 9.008±4.56 6.404±0.00 1.004±0.00 0.493±0.04 0.727±0.18 1.006±0.51 2.030±1.36 0.972±0.53
ENST00000435320 N/A N/A N/A N/A N/A N/A N/A N/A 0.752±0.00 N/A N/A N/A N/A N/A
ENST00000437704 0.587±0.00 0.520±0.00 2.570±0.00 3.165±0.52 0.488±0.05 0.354±0.00 4.522±1.84 1.440±0.00 0.011±0.00 N/A 1.484±0.00 0.664±0.31 0.542±0.18 0.240±0.14
ENST00000472193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487695 N/A N/A 8.137±0.00 N/A 0.860±0.00 0.713±0.00 6.844±1.73 0.330±0.00 1.518±1.45 1.604±0.00 1.402±0.63 1.196±0.00 N/A 0.452±0.00
ENST00000625084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119042 ENST00000260926 N/A N/A N/A 1.534±0.00 N/A 9.505±0.00 0.040±0.00 N/A 0.405±0.00 N/A 0.148±0.00 N/A 0.127±0.00 N/A
ENST00000417098 0.544±0.00 0.345±0.00 1.447±0.00 3.978±1.12 1.656±0.00 14.880±0.00 0.105±0.00 N/A N/A N/A 0.235±0.00 0.433±0.32 0.200±0.10 0.912±0.00
ENST00000428695 0.787±0.00 0.596±0.00 N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A 0.305±0.00 N/A N/A N/A
ENST00000440919 N/A N/A N/A N/A 2.182±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443023 0.437±0.00 0.110±0.00 N/A N/A 0.760±0.00 N/A 0.141±0.00 0.358±0.00 0.235±0.00 0.060±0.00 0.353±0.00 0.182±0.09 N/A 0.513±0.00
ENST00000457245 N/A N/A N/A 16.219±0.00 2.470±0.00 N/A 0.063±0.00 0.182±0.00 0.302±0.00 N/A N/A N/A N/A N/A
ENST00000463386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483346 N/A N/A N/A N/A 1.840±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.580±0.00 N/A N/A
ENST00000614512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.715±0.00
ENSG00000225421 ENST00000440609 N/A N/A N/A N/A 0.291±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00
ENSG00000225953 ENST00000416200 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A 1.390±0.00
ENST00000441234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230407 ENST00000457712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00
ENSG00000231557 ENST00000456031 N/A N/A N/A 0.069±0.00 N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000236653 ENST00000443261 N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.592±0.36
ENST00000451266 0.107±0.00 0.236±0.00 N/A 0.084±0.00 0.134±0.00 N/A 0.035±0.00 0.233±0.00 N/A N/A 0.019±0.00 N/A N/A 0.220±0.00
ENST00000456248 N/A N/A N/A 0.046±0.02 0.010±0.00 N/A 0.015±0.01 N/A N/A N/A N/A N/A N/A N/A
ENSG00000252511 ENST00000516702 N/A 0.619±0.00 N/A 0.323±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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