C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076791-ENSDARG00000045463 CGP 7955 24:997462-1035824
GeneTranscriptPositionBiotype
ENSDARG00000045463 (ralaa)
v-ral simian leukemia viral oncogene homolog Aa (ras related) 		ENSDART00000066863 (ralaa-001) 1023798-1035824 protein_coding
ENSDART00000147508 (ralaa-002) 1029589-1035752 protein_coding
ENSDARG00000076791 (cdk13)
cyclin-dependent kinase 13 		ENSDART00000114544 (cdk13-001) 997462-1023107 protein_coding
ENSDART00000144415 (cdk13-002) 1012794-1016235 processed_transcript
ENSDART00000146140 (cdk13-003) 1012677-1015759 retained_intron
CIL_0000LG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041297-ENSMUSG00000008859 CGP 10090 13:17715962-17944239
GeneTranscriptPositionBiotype
ENSMUSG00000008859 (Rala)
v-ral simian leukemia viral oncogene homolog A (ras related) 		ENSMUST00000009003 (Rala-001) 17880575-17944239 protein_coding
ENSMUSG00000041297 (Cdk13)
cyclin-dependent kinase 13 		ENSMUST00000042365 (Cdk13-201) 17715962-17805097 protein_coding
ENSMUSG00000080574 (Mir466i)
microRNA 466i 		ENSMUST00000116924 (Mir466i-201) 17747473-17747593 miRNA
ENSMUSG00000081285 (Gm18859)
predicted gene, 18859 		ENSMUST00000118792 (Gm18859-001) 17820946-17821770 processed_pseudogene
ENSMUSG00000095025 (Gm24018)
predicted gene, 24018 		ENSMUST00000083232 (Gm24018-201) 17809591-17809697 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LG_0001ENSDARG00000045463ENSDART00000066863ENSDART00000147508ENSDARG00000076791ENSDART00000114544ENSDART00000144415ENSDART00000146140CIL_0000LG_0002ENSMUSG00000008859ENSMUST00000009003ENSMUSG00000041297ENSMUST00000042365ENSMUSG00000080574ENSMUST00000116924ENSMUSG00000081285ENSMUST00000118792ENSMUSG00000095025ENSMUST00000083232
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LG_0001ENSDARG00000045463ENSDART00000066863ENSDART00000147508ENSDARG00000076791ENSDART00000114544ENSDART00000146140CIL_0000LG_0002ENSMUSG00000008859ENSMUST00000009003ENSMUSG00000041297ENSMUST00000042365ENSMUSG00000080574ENSMUST00000116924ENSMUSG00000081285ENSMUST00000118792ENSMUSG00000095025ENSMUST00000083232
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045463 ENSDART00000066863 N/A N/A N/A 6.898±1.75 N/A N/A 3.953±0.46 0.577±0.75 0.622±0.00 N/A 1.838±0.00 N/A N/A N/A
ENSDART00000147508 N/A N/A N/A N/A N/A N/A N/A N/A 0.504±0.00 N/A 1.344±0.00 N/A N/A N/A
ENSDARG00000076791 ENSDART00000114544 N/A N/A N/A 2.869±2.30 N/A N/A 1.598±0.63 1.205±0.09 1.840±0.00 N/A 2.299±0.00 N/A N/A N/A
ENSDART00000144415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146140 N/A N/A N/A N/A N/A N/A 0.441±0.00 0.483±0.09 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008859 ENSMUST00000009003 10.357±0.99 40.961±4.95 13.360±0.54 22.587±6.14 10.111±4.80 12.439±5.44 6.616±0.37 9.263±0.77 5.393±0.95 16.069±1.37 8.412±0.37 14.658±3.35 16.427±5.28 7.610±1.96
ENSMUSG00000041297 ENSMUST00000042365 4.686±1.54 10.710±4.86 4.509±0.19 8.009±3.30 7.595±4.66 7.127±2.02 1.632±0.56 2.279±0.83 3.921±1.82 6.037±1.59 1.266±0.37 7.501±5.68 7.280±2.51 6.017±0.66
ENSMUSG00000080574 ENSMUST00000116924 2051.780±0.00 N/A N/A N/A N/A N/A N/A N/A 6.610±0.00 N/A N/A N/A N/A 1146.260±0.00
ENSMUSG00000081285 ENSMUST00000118792 0.060±0.03 N/A 0.016±0.01 0.020±0.01 0.461±0.39 N/A 0.126±0.06 0.078±0.05 0.048±0.03 N/A 0.085±0.00 0.104±0.04 0.045±0.02 0.102±0.08
ENSMUSG00000095025 ENSMUST00000083232 N/A N/A N/A N/A N/A N/A N/A N/A 2.069±0.00 N/A N/A N/A N/A N/A

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