C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18859
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118792 Gm18859-001 ENSMUSG00000081285 10090 + 13:17820946-17821770 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000118792
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000118792 0.060±0.03 0.016±0.01 0.020±0.01 0.461±0.39 0.126±0.06 0.078±0.05 0.048±0.03 0.085±0.00 0.104±0.04 0.045±0.02 0.102±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LG CIL_0000LG_0002 CGP 13:17715962-17944239

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 333
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 917
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 656
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 891
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 917
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 917
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 350
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 721
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 649
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 608
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 285
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 564
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 603
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 811
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 645
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 527
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 664
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 616
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 516
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 468
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 372
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 857
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 329
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 656
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 656
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 806
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 651
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 702
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 473
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 281
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 643
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 669
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 737
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 658
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 558
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 558
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 793

Loading