C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-like modifier activating enzyme 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322244 UBA6-001 ENSG00000033178 9606 - 4:67612652-67701179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322244
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322244 2.460±0.00 2.363±0.00 0.645±0.00 2.154±0.39 2.656±0.38 1.859±0.44 0.761±0.43 1.615±0.65 1.643±0.54 2.675±0.70 0.700±0.22 2.919±0.45 1.196±0.22 3.618±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M6 CIL_0000M6_0001 CGP 4:67558728-67701179
CIL_0000M5 CIL_0000M5_0001 CGP 4:67612652-67754360

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005829 IBA cytosol
GO:0006464 IEA cellular protein modification process
GO:0006511 IMP ubiquitin-dependent protein catabolic process
GO:0008641 IEA small protein activating enzyme activity
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0019780 IMP FAT10 activating enzyme activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039373 Uba6-001 protein_coding Mus_musculus 0 3908
ENSMUST00000113373 Uba6-003 protein_coding Mus_musculus 0 3840
ENSMUST00000147734 Uba6-002 retained_intron Mus_musculus 0 3217

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