C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6254
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168178 Gm6254-001 ENSMUSG00000066538 10090 + 14:122117938-122119009 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168178
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168178 0.096±0.02 0.222±0.00 0.814±0.59 0.728±0.55 0.171±0.10 0.321±0.00 0.049±0.00 0.088±0.03 0.694±1.17 0.143±0.00 0.040±0.01 0.191±0.13 0.268±0.22 0.207±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093F CIL_00093F_0002 VISTA 14:121953729-122558284
CIL_0000O8 CIL_0000O8_0002 CGP 14:122107038-122402232

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 1626
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1489
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 1629
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1476
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 1072
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 974
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 963
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 224
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1626
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1402
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 0 723
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 462
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 1197
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 955
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 0 189
ENST00000507583 RP11-395I6.1-001 processed_pseudogene Homo_sapiens 4e-24 113
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 1260
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1474
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 1000
ENST00000591842 HNRNPA3P16-001 processed_pseudogene Homo_sapiens 0 754
ENST00000604913 HNRNPA3P9-001 processed_pseudogene Homo_sapiens 0 734
ENST00000619693 CTD-3093M3.1-001 unprocessed_pseudogene Homo_sapiens 3e-23 110

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