C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 9 superfamily member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376387 TM9SF2-001 ENSG00000125304 9606 + 13:99501417-99564006 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376387
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376387 7.928±0.00 26.390±0.00 12.222±0.00 11.366±7.17 15.462±10.04 28.687±0.22 14.450±5.40 18.237±13.01 6.034±1.61 20.458±2.92 2.673±0.50 34.756±24.31 44.324±21.65 25.989±19.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093F CIL_00093F_0001 VISTA 13:99386191-99989823
CIL_0000O8 CIL_0000O8_0001 CGP 13:99501417-99897134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026624 Tm9sf2-001 protein_coding Mus_musculus 0 3461
ENSMUST00000171318 Tm9sf2-002 protein_coding Mus_musculus 0 1600
ENSMUST00000170007 Tm9sf2-003 nonsense_mediated_decay Mus_musculus 0 470

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