C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000RW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000022187-ENSDARG00000002131 CGP 7955 4:22708297-23054090
GeneTranscriptPositionBiotype
ENSDARG00000022187 (usp6nl)
USP6 N-terminal like 		ENSDART00000100391 (usp6nl-201) 22708304-22809614 protein_coding
ENSDART00000123199 (usp6nl-202) 22708297-22794508 protein_coding
ENSDART00000143571 (usp6nl-001) 22711646-22775479 protein_coding
CIL_0000RW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039046-ENSMUSG00000002107 CGP 10090 2:6322667-7509563
GeneTranscriptPositionBiotype
ENSMUSG00000039046 (Usp6nl)
USP6 N-terminal like 		ENSMUST00000042503 (Usp6nl-003) 6352733-6443494 protein_coding
ENSMUST00000114937 (Usp6nl-001) 6322667-6446390 protein_coding
ENSMUST00000132391 (Usp6nl-002) 6322772-6421012 processed_transcript
ENSMUST00000150515 (Usp6nl-004) 6420922-6424835 processed_transcript
ENSMUSG00000062319 (Gm10115)
predicted gene 10115 		ENSMUST00000076071 (Gm10115-001) 6950453-6951680 sense_intronic
ENSMUSG00000065824 (Gm26315)
predicted gene, 26315 		ENSMUST00000083890 (Gm26315-201) 7076094-7076414 misc_RNA
ENSMUSG00000075538 (Gm10855)
predicted gene 10855 		ENSMUST00000100426 (Gm10855-001) 6932541-6935081 sense_intronic
ENSMUSG00000085716 (Gm13388)
predicted gene 13388 		ENSMUST00000126659 (Gm13388-001) 6431786-6436033 antisense
ENSMUSG00000086109 (Gm13391)
predicted gene 13391 		ENSMUST00000128589 (Gm13391-001) 6472272-6472903 lincRNA
ENSMUST00000147685 (Gm13391-002) 6472000-6478619 lincRNA
ENSMUSG00000087079 (Gm13389)
predicted gene 13389 		ENSMUST00000142774 (Gm13389-001) 6884270-6886924 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000RW_0001ENSDARG00000022187ENSDART00000100391ENSDART00000123199ENSDART00000143571CIL_0000RW_0002ENSMUSG00000039046ENSMUST00000042503ENSMUST00000114937ENSMUST00000132391ENSMUST00000150515ENSMUSG00000062319ENSMUST00000076071ENSMUSG00000065824ENSMUST00000083890ENSMUSG00000075538ENSMUST00000100426ENSMUSG00000085716ENSMUST00000126659ENSMUSG00000086109ENSMUST00000128589ENSMUST00000147685ENSMUSG00000087079ENSMUST00000142774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000RW_0001ENSDARG00000022187ENSDART00000100391ENSDART00000123199ENSDART00000143571CIL_0000RW_0002ENSMUSG00000039046ENSMUST00000042503ENSMUST00000114937ENSMUSG00000062319ENSMUST00000076071ENSMUSG00000065824ENSMUST00000083890ENSMUSG00000075538ENSMUST00000100426ENSMUSG00000085716ENSMUST00000126659ENSMUSG00000086109ENSMUST00000128589ENSMUST00000147685ENSMUSG00000087079ENSMUST00000142774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000022187 ENSDART00000100391 N/A N/A N/A 1.936±0.00 N/A N/A 3.809±2.20 0.566±0.00 0.293±0.00 N/A 1.187±0.00 N/A N/A N/A
ENSDART00000123199 N/A N/A N/A 2.802±2.16 N/A N/A 1.950±0.04 1.140±0.51 N/A N/A 0.624±0.00 N/A N/A N/A
ENSDART00000143571 N/A N/A N/A N/A N/A N/A 1.672±0.00 1.462±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039046 ENSMUST00000042503 2.387±1.26 1.749±0.61 0.588±0.00 3.901±1.00 1.906±0.46 2.971±0.75 0.402±0.09 1.468±0.48 1.882±0.75 3.083±0.37 0.186±0.04 3.104±0.87 4.106±2.57 2.832±0.26
ENSMUST00000114937 1.312±0.72 2.447±0.00 2.782±0.46 2.356±0.61 1.349±0.51 3.367±0.92 0.539±0.17 2.300±0.80 2.373±0.96 3.413±1.04 0.646±0.14 3.760±1.22 2.651±0.33 1.890±0.42
ENSMUST00000132391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062319 ENSMUST00000076071 0.111±0.00 0.389±0.00 0.260±0.10 0.440±0.46 0.169±0.02 N/A 0.089±0.02 N/A 0.020±0.01 0.151±0.06 N/A 0.197±0.23 0.025±0.01 0.047±0.01
ENSMUSG00000065824 ENSMUST00000083890 0.440±0.31 N/A 0.645±0.16 414.826±414.72 0.842±0.26 0.193±0.00 0.360±0.20 0.415±0.34 196.863±14.33 0.762±0.41 0.351±0.00 0.587±0.00 0.164±0.00 0.245±0.08
ENSMUSG00000075538 ENSMUST00000100426 0.085±0.06 N/A 0.201±0.02 0.121±0.04 0.076±0.01 0.087±0.03 0.131±0.01 0.017±0.00 0.011±0.01 0.086±0.02 0.012±0.00 0.106±0.09 0.036±0.01 0.023±0.01
ENSMUSG00000085716 ENSMUST00000126659 0.117±0.00 N/A N/A N/A N/A 0.464±0.00 N/A N/A 0.160±0.09 N/A N/A N/A 1.637±0.84 N/A
ENSMUSG00000086109 ENSMUST00000128589 0.310±0.00 N/A N/A 0.438±0.00 N/A N/A N/A N/A 0.208±0.00 N/A N/A 1.409±0.45 1.284±0.00 N/A
ENSMUST00000147685 0.109±0.05 0.132±0.05 N/A 0.171±0.00 0.387±0.34 0.098±0.00 N/A 0.087±0.03 0.042±0.03 0.079±0.02 N/A 0.405±0.22 0.235±0.12 N/A
ENSMUSG00000087079 ENSMUST00000142774 0.160±0.00 N/A 0.250±0.03 N/A 0.377±0.23 0.176±0.00 0.473±0.32 N/A 0.013±0.00 0.229±0.04 0.060±0.00 0.679±0.18 0.018±0.01 0.120±0.06

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